Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03073 ATGCTTCCATATCTGTTACCTCTGTTCTTCATCCTTCCCTTACTCTTCTTCTTCTTGGTGAGACCTTTTTCTGCGGGTTTGAAGAAGAAAGATATAGCTTCTTCACAGAGCATTACCCTCCCCAAAGCATACCCATTGATAGGTTCCTACTTGGCCGCCAAAGCCAACGCCAACCGCCGTATCCAATGGTTATCCGACATCGTCCAAATCTCACCAGCCGCCACCTTCACCCTCCACCACCCATTGGGCAACCGGCAAGTCATCACCGGCAACCCAGCCACCGTACAGCACATCCTCAAAACCCGTTTCTCCAATTATCAAAAAGGCAGCACATTTATAACAACCCTCTCTGATATCCTCGGCACAGGAATTTTCAACACTGATGGTGATAATTGGAAGTTTCAGAGACAAGTTGCCAGCCATGAATTCAACACAAAGTCTCTGCGTAAATTCGTTGAACATGTCGTGGATGCCGAGCTCAACAACCGTCTCCTCCCAATCCTGACTTCTGCTGCCGCAGAACAAGACAAAGTCTTAGATTTTCAGGACATTCTCCAACGTTTTGCCTTCGACAACATCTGCAAAATCGCATTCGGCTTCGACCCAGAATACCTGACGCCGTCACTTGAACGGAGCAAGTTCGCTCAAGCTTTTGAAGAAGCTACTGAAATCAGCAGCAAACGGTTCCGTGGGCTGTTACCGTTAATCTGGAAAATCAAGAGAGAACTGAACATAGGATCGGAAAAGCAATTGCGAATAGCAGTGAAGGAAGTGCATGAATTCGCGAAGAAAATAGTGAGACAGAAGAAGCAAGAGCTGAAGGAGAAGGAATCGCTGGAATCAGTTGACATGCTGTCACGGTTCTTGAGTTCAGGGCATTCCGACGAAGACTTTGTAACAGACATAGTTATAAGTTTTATATTAGCAGGGAAGGATACGACATCGGCGGCGCTGACGTGGTTTTTCTGGCTGTTATGGAAGAACTCGCGGGTAGAAGAGGAGATTTTGAAAGAGATAAGTGAGAAATCTGAAGCTCCTGATTACGATGAAGTGAAGGAGATGGTTTACACGCACGCTGCGTTGTGCGAGAGCATGAGGTTATACCCTCCGGTGCCCATGGATTCGAAGCAAGCGATGGACGACGACGTTTTGCCGGATGGGACGGTGGTGAAGAAGGGGACGTTGGTGACATATCACGTGTATGCGATGGGGAGAATGGAGAGCCTTTGGGGTAGTGATTGGGCAGAGTATAGGCCAGAGAGGTGGTTGGAGTTGTCTGAGAATGGAAAGTGGAGGTTCGTTGGGAGGGATTCGTTCTCATATCCGGTGTTTCAGGCGGGTCCCAGGATTTGTTTGGGGAAGGAGATGGCGTTTATGCAGATGAAGAGGTTGGTGGCTGGGATTCTGAGCCGCTTCACGGTGAGGCCACTGCCCCATTTGGATGAACATCCCAACTTCATTTCCTTCCTCACTTCCCAAATGGAAGGTGGTTTCCCCGTCACCATTCACCAGAGGCTTCATCCTCCTTCAAATTAA 1536 0.4844 MLPYLLPLFFILPLLFFFLVRPFSAGLKKKDIASSQSITLPKAYPLIGSYLAAKANANRRIQWLSDIVQISPAATFTLHHPLGNRQVITGNPATVQHILKTRFSNYQKGSTFITTLSDILGTGIFNTDGDNWKFQRQVASHEFNTKSLRKFVEHVVDAELNNRLLPILTSAAAEQDKVLDFQDILQRFAFDNICKIAFGFDPEYLTPSLERSKFAQAFEEATEISSKRFRGLLPLIWKIKRELNIGSEKQLRIAVKEVHEFAKKIVRQKKQELKEKESLESVDMLSRFLSSGHSDEDFVTDIVISFILAGKDTTSAALTWFFWLLWKNSRVEEEILKEISEKSEAPDYDEVKEMVYTHAALCESMRLYPPVPMDSKQAMDDDVLPDGTVVKKGTLVTYHVYAMGRMESLWGSDWAEYRPERWLELSENGKWRFVGRDSFSYPVFQAGPRICLGKEMAFMQMKRLVAGILSRFTVRPLPHLDEHPNFISFLTSQMEGGFPVTIHQRLHPPSN* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03073 511 CDD CYP86A 75 498 - -
Rops8g03073 511 Pfam Cytochrome P450 79 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03073 511 SUPERFAMILY Cytochrome P450 41 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03073 511 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03073 511 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03073 511 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03073 511 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03073 511 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03073 511 PANTHER CYTOCHROME P450 32 500 - -
Rops8g03073 511 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03073 511 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03073 511 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03073 511 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03073 511 Gene3D Cytochrome P450 24 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03073 Rops-Chr8 68160176 68162035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03073 8 505 Cytochrome P450 AT5G63450 47.012 4.99e-155 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03073 K20769 K13407 gmx:100818732 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03073 8 68160176 68162035 Rops8g03073 8 68160176 68162035 ECH
Rops8g03073 8 68160176 68162035 Rops6g01269 6 27881109 27882685 PCT