Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03066 ATGGAGGAGGTTGAAGAAGCTAACAGAGCAGCTGTCGAGAGCTGTCATAGATTTCTAAGTAAGTTGTCTCAGCCACAGGATCAAGTTCAGTATAGGAATTTAATGGTGGAAAATGGAGAGGTTGTAATGAGGTTCAAGAAAGTTGTTTCCTTGCTCAGTAATGGTTTGGGTCATGCAAGAGTCAGAAAGTTCAAGAAACCTCAAATCCCTTTTTCTCAAAGTATCCTCTTGGACAACCCAAATTGCAAAACCAATCATCAATTAAACAATCTGCAGTTTCCCCAAACAAGTTTTCCAGACAATTCAGTTCAGGAATTGGGTTCAAGTGTCAGAAACTCACTATGTCTGGGAAACCCTTCTTTGGAATTGAGCTCCAATGGGAAAAGTCCTCTTCACCTTACCCAGCAACCCCCATCAGCATATTACCACATCCTTCAACAGCAACAAATGAAACATCAAGCAGAAATGATGTTCAGGAGGAACAATAATGTCATAAATCTGAATTTTGATAGCTCTAGCTGCACACCTTCAATGTCATCTACTAGGTCTTTCATTTCTTCCTTGAGCATAGATGGAAGTGTAGCTAACATGGATGGAAGTTCCTTCCATTTAGTAGGAGCTGCACGTTCCTCTGATCAGAATTCACAACAGCACAAGAGAAAATGTTCTGCCAGAGGTGATGAGGGTAGCGTGAAATGTGGGAGCAGTTCTAGATGCCATTGCCCAAAGAAGAGGAAACATAGAGTTAAAAGATCAATTAAGGTGCCTGCTATCAGTAACAAACTTGCAGATATCCCTCCTGATGATTATTCATGGAGGAAGTACGGGCAGAAGCCAATCAAGGGATCACCTCACCCTAGGGGATACTACAAGTGCAGCAGCATGAGAGGCTGCCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGAGCCTACCATGCTAATAGTTACCTATGAAGGTGACCACAACCACCCCAAATTACAAACACAATCTGCAAATGCATGA 1005 0.4259 MEEVEEANRAAVESCHRFLSKLSQPQDQVQYRNLMVENGEVVMRFKKVVSLLSNGLGHARVRKFKKPQIPFSQSILLDNPNCKTNHQLNNLQFPQTSFPDNSVQELGSSVRNSLCLGNPSLELSSNGKSPLHLTQQPPSAYYHILQQQQMKHQAEMMFRRNNNVINLNFDSSSCTPSMSSTRSFISSLSIDGSVANMDGSSFHLVGAARSSDQNSQQHKRKCSARGDEGSVKCGSSSRCHCPKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPTMLIVTYEGDHNHPKLQTQSANA* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03066 334 ProSiteProfiles WRKY domain profile. 261 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops8g03066 334 SUPERFAMILY WRKY DNA-binding domain 264 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops8g03066 334 FunFam WRKY transcription factor 65 250 327 - -
Rops8g03066 334 SMART WRKY_cls 266 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops8g03066 334 Gene3D WRKY domain 251 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops8g03066 334 Pfam WRKY DNA -binding domain 268 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops8g03066 334 Pfam Plant zinc cluster domain 219 264 IPR018872 -
Rops8g03066 334 MobiDBLite consensus disorder prediction 208 237 - -
Rops8g03066 334 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 331 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03066 Rops-Chr8 68031960 68034492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03066 1 331 WRKY Transcription Factor Family AT2G30590 57.218 2.14e-126 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops8g03066 WRKY 1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03066 - - gmx:100170681 570.466