Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03064 ATGGCTCTTGCTGGGTCTGCTATGGAGCTTCCAGCTTCTTCTATAAAGAAGAAAACTGCTGTTTCTAGAAGCTGGATTTTGCTGGACCGTGACGGCAGAGGCACTGCACTGGATGTGGACAAGTATGCTATCATGCGCTTCGTTGATATTCACGCAAGAGACCTTCGAATTCTGGACCCTCTTCTTTCTTATCCTTCCACCATTCTGGGCAGAGAGAAAGTCATTGTTCTCAATTTAGAGCATATTAAAGCTATTATCACTGCGGAAGAGGTGTTGCTTAGAGACCCAATGAACGATGATGTTGTGCCTATTGTTGAAGAACTTCGACGACGGTTACCTAAAGAAACTGTTACTGGCCAAGGCCAAGGAGAAGAAGAGCCCTGTGCTCAAGAGGCTGATGAAGAATTTCCATTTGAGTTCCGGGCCTTAGAAGTTGTATTAGAGGCAATTTGTAGTTTTCTTGACGCACGAACAAGAGAGTTGGAGACTGCTGCTTATCCAGCTTTGGATGAATTAACCTCTAAGATCAGCAGTCGTAATTTAGATAAAGTGAGAAAAATAAAAAGTGCAATGACGAGGTTGACAAATCGAGTTCAAAAGATAAGAGATGAATTAGAAAACCTACTTGACGATGATGATGACATGGCTGATCTTTACTTATCAAGAAAGTCGGCTGTTTCATCCTCTCCCACAAGTAGCTCTGATGCTCCCAACTGGCTTCATAGCTCTCCAAATCCTGGTTCAAAAATACACAGATCAAGCAGAGCAAGTACAACAACAGTTCAAGGGGAGAATGATGTTGAGGAGCTAGAAATGTTACTTGAGGCCTATTTCATGCAAATTGACAGCACATTAAATAAATTGACCACATTGCGAGAATATATTGATGACACAGAAGATTACATCAACATACAGCTTGACAATCATCGAAATCAACTGATTCAGCTAGAGCTCTTCCTCAGTTCCGGGACCGTGTGTCTGTCCATATACTCATTGGTGGCTGCAATATTTGGTATGAACATTCCATATACATGGAGAGAAGGTCACGGATATATATTTAAATGGGTGGTGATCCTTTCGGGAATGGCTTGTGCATCCTTGTTTTTATCCATAGCATCTTATGCCCGACGCAAAGGCCTTGTTGGGTCATGA 1152 0.4227 MALAGSAMELPASSIKKKTAVSRSWILLDRDGRGTALDVDKYAIMRFVDIHARDLRILDPLLSYPSTILGREKVIVLNLEHIKAIITAEEVLLRDPMNDDVVPIVEELRRRLPKETVTGQGQGEEEPCAQEADEEFPFEFRALEVVLEAICSFLDARTRELETAAYPALDELTSKISSRNLDKVRKIKSAMTRLTNRVQKIRDELENLLDDDDDMADLYLSRKSAVSSSPTSSSDAPNWLHSSPNPGSKIHRSSRASTTTVQGENDVEELEMLLEAYFMQIDSTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVAAIFGMNIPYTWREGHGYIFKWVVILSGMACASLFLSIASYARRKGLVGS* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03064 383 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 13 381 IPR039204 -
Rops8g03064 383 MobiDBLite consensus disorder prediction 226 263 - -
Rops8g03064 383 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 319 369 IPR045863 -
Rops8g03064 383 Coils Coil 184 211 - -
Rops8g03064 383 Gene3D Magnesium transport protein CorA, transmembrane region 102 313 - -
Rops8g03064 383 CDD Mrs2_Mfm1p-like 25 380 IPR039204 -
Rops8g03064 383 FunFam Magnesium transporter MRS2-1 13 96 - -
Rops8g03064 383 Pfam CorA-like Mg2+ transporter protein 268 369 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Rops8g03064 383 Gene3D - 9 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03064 Rops-Chr8 67997647 68001127 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03064 14 356 MRS2 Gene Family AT5G64560 76.136 7.40e-167 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03064 K16075 - gmx:100799368 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03064 8 67997647 68001127 Rops8g03064 8 67997647 68001127 ECH