Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03047 ATGACGAGAGGGATGGGAGTAAGGGAGCAGAAGCTTGAAAAACAAATGGGGTGCATGGCGGGGTTCCTTCACATTTTCGATCGCCACCAGGTATTCGCTGGAAAACGCATCGAATCCGCCAAAAGACTCCCTCCCTCTGCTCCTCCCGAAACCCATTCATCTCCTGAGCGGGCCTCAGACGGCGGCTCTCCGGCGGAATCAGAAACAACAACTCAAGCTACAAAATCGCCTCTTCCTCATCCGGTTTTGGAATTCAAGGAAAACAAGAGATCTTTCTTGAAATTCTCCAGAGAAGCACCGAGACTATCCTTGGATAGCAGAGCCATTCTGGATGCCAAAGGAACCTTCCATCCTGAAGAGAAACAGCGTCGATCCACCAGCGTCGTTGCAAGGCTCATGGGTCTCGAAGATTCCGACCCTGAGCTCCGAAGATCCGCTTCGGAATCCAGGGCTTCCAGAGATCTACCACAACAACAGTATCGTTTCTTCGACACCACTAATTTCCAGTTAAAGCAGTTTCATCGGAATGGTGGTAGCAAAGCCTCAGATCCAAACGCGAAGACAGAGCCAAACAGGGGAATGATAAGACAAAAGAAGAGTTTCTTCGATTCCGCTGACTTTTTCCCTTCAGGGCCAAAACAGTGTGTTTCTGGCTACGGAGAGATCGAGAGGAAGTTGAAGATGCGAGGGATCGATGAACCTTCTAAGGATCTGGAAACTCTCAAGCAAATCCTCGAGGCCTTGCAGCTCAAAGGCCTTCTTCATTCCAAGAAATCCACGCTTCCATTGAACCAAAGGAACTTCGTCTTGGACGACACCGTTTTCTGGAACGATTCTCCCATTGTTGTCATGAAGCCCGCAATGTCTCCCGGCTCGTTAAAACGAACCGGCTGGACCGGAAGCAATTCTCCACCGCCCTCCACATTCCGGTCGAGCCCGAGGGCTCGCCCTGAAACGGATAGCAATACAAGGGCCCAATCTCAGCCCAGGGGCAGAAGCCCAAGCTCGCCCACGCGCAGCCCGAACCGGACGAGGAAACTGACAAATGCGGAACCGCAGAGAAAAGTGAATGAATGTGTTGATCGCAGAAGGACCACTCCGGTTCATTCGACCCCATTAAGCTCGAGAAGAAATGGACCAGACCGGTCGCCGAGGTTAAGAAAAGCCATCAATGACCAAAAGGAGAAAGCCATGCTCGTGGGTGTCGCCACGGCGGAGGATGAATTATCCACCGTTTCCGACAGCAGCTTCAGCACGTCCTCATACACCGATACAGAGAGGTACAAGATGGAGGACCAGTACAGGGAAGGGAAGAATCTATTGCAGAGGTGTGACAAGTTGCTGAACAGCATAGCGGAAATAACAGCAGGAGGGACAGAGCTACAACCGAGTCCAGTATCGGTGCTTGACTCGTCGTTTTACAAGGACGTGTCGTCGTGCTCACCATCCCCGGTAATGAAACGGTGCATTGATTACAAAGATCAAGCAGCGGAGTCAGAAGATGATGCGTGGAGTGCAGCATTGTGTTGCAGCGAAGCAAAGTCCGAGGATTGCGATTTCGTATATGTTTCTGAAATACTGCGTGCTTCTAATTACTTGCCGGAAGACAGCGACGTTTTCTTGTTACTGGAGAAGCAACAGTACCTTAAAGGGAAAGACACCTCCAAAGCCTCCACCATCCGAAGACGCTTGATCTTCGACACCATTCACGAGATCCTCAACCGCAACCGCCGTTTGCCACCATGGAAGGCGGAGAACGGGCCGCCGTTAAATCGGATCTGGTCGGAGTTTCTGAGGATCCGAGAGACGGAGGTGTCGGAGGACCTGTTCGAAGTGATATGTGGATTGTTGAGGAAGGACATGGCGGAGAACAATGAATGGGGAGAATGCCCCATGGAGATTGGGGATATGGTTTTGGACATTGAACGATTCATATTCAAAGATCTCATCGGCGAAACTATTCAACATCTCGCGTCGTTTAAGGGACAACGTAACAAAGTCTCGACGCTTTGCAGGAAGTTGCTGTTTTGA 2031 0.5081 MTRGMGVREQKLEKQMGCMAGFLHIFDRHQVFAGKRIESAKRLPPSAPPETHSSPERASDGGSPAESETTTQATKSPLPHPVLEFKENKRSFLKFSREAPRLSLDSRAILDAKGTFHPEEKQRRSTSVVARLMGLEDSDPELRRSASESRASRDLPQQQYRFFDTTNFQLKQFHRNGGSKASDPNAKTEPNRGMIRQKKSFFDSADFFPSGPKQCVSGYGEIERKLKMRGIDEPSKDLETLKQILEALQLKGLLHSKKSTLPLNQRNFVLDDTVFWNDSPIVVMKPAMSPGSLKRTGWTGSNSPPPSTFRSSPRARPETDSNTRAQSQPRGRSPSSPTRSPNRTRKLTNAEPQRKVNECVDRRRTTPVHSTPLSSRRNGPDRSPRLRKAINDQKEKAMLVGVATAEDELSTVSDSSFSTSSYTDTERYKMEDQYREGKNLLQRCDKLLNSIAEITAGGTELQPSPVSVLDSSFYKDVSSCSPSPVMKRCIDYKDQAAESEDDAWSAALCCSEAKSEDCDFVYVSEILRASNYLPEDSDVFLLLEKQQYLKGKDTSKASTIRRRLIFDTIHEILNRNRRLPPWKAENGPPLNRIWSEFLRIRETEVSEDLFEVICGLLRKDMAENNEWGECPMEIGDMVLDIERFIFKDLIGETIQHLASFKGQRNKVSTLCRKLLF* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03047 676 MobiDBLite consensus disorder prediction 348 365 - -
Rops8g03047 676 MobiDBLite consensus disorder prediction 136 150 - -
Rops8g03047 676 MobiDBLite consensus disorder prediction 294 347 - -
Rops8g03047 676 MobiDBLite consensus disorder prediction 38 83 - -
Rops8g03047 676 Pfam Domain of unknown function (DUF4378) 519 652 IPR025486 -
Rops8g03047 676 PANTHER LONGIFOLIA PROTEIN 9 59 IPR033334 GO:0051513
Rops8g03047 676 MobiDBLite consensus disorder prediction 134 157 - -
Rops8g03047 676 MobiDBLite consensus disorder prediction 52 77 - -
Rops8g03047 676 MobiDBLite consensus disorder prediction 287 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03047 Rops-Chr8 67712504 67716451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03047 419 676 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 47.348 2.01e-67 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03047 - - lja:Lj1g3v4449210.1 808.905