Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03044 ATGAGTCTGGAAAAGAATCCTAGTGTATTTTTCGATGTCTCAGTTGATGGGGACCCCGTGGAAAGAATTGTAATTGAGCTTTTTGCCAGTACAGTTCCCAAGACAGCCGAGAATTTTCGGGCGCTTTGTACAGGTGAGAAGGGCATTGGAGAATCAACTGGGAAACCTTTGCATTATAAAGGAACATGCTTTCATCGTATACTTAAAGGTTTTATGGCGCAAGGTGGTGATTTTTCAAGGGGTAATGGCACTGGTGGAGAAAGTATTTATGGAGGAAAGTTTGCGGATGAAAATTTCAAACTAAAACATGATGGGCCTGGTGTTCTTTCTATGGCTAATAGTGGTCCTAACACAAATGGATCTCAGTTTTTTATTACGTTCAAGCGCCAGCCTCATCTTGATGGGAAACATGTGGTTTTTGGAAAAGTTTCCAAGGGAATGGAGATTCTGAAGAAAATTGAACAGGTGGGTACATCTGATGGGAAACCTGCCCAGCCAGTAAAAATTGTTGATTGTGGTGAAATCTCTAAAGCAAAAATTCAGCACACAGTCGAGAAGGAGAAAGGGAAAAGGAGAAAGTCAGGGAAATCCTTGACTTCTGATGATGATAGTTCTGACAAAAAATTAAGGGGGAAAAGAAAAAAATCTTCCAAAAACACAAGAAAGAGGAGGAGGAGATACTCAACATCTGATAGTGATCGTGATAGTGGTAGTGATAGTTATTCCTCAGATTCTGAGTTGGATTCAGCTTCTGATTCTGAATCGGATTCTGATTCAAGTTCCTCTAGTTATGGGAAACACCAGAAGAGGAAGAGAAATAATCGCAAGCATGGGAAGAAGAGAAAAACTGGACGAAACCAGAGAAGGAGAAGCCGACACAGTAGAAATAGAAGATCAAGACACAAGTCCAAATGGAGTTCTGAGGATTCAAGAAATACAGTAAGTGAGAGTTCTAGTACTAGTGACAGTAGTTCTGGTGATGAGAAAGCTGATCGTCATGTCTCTGGTCGTAAAGCACGTGCTGACAATAAAGCTCAACGAAATCTTGACACAGGAAAGCAATCTTCTAGCCTTCTCCTACAAAGTCAAACTATTCCAGAACAAGGGATGGATCCCAAGGTTAGAAGAACAGTGGACAAGCAATCACATGAAGAAGGTGAATTGTCCCCAGAAAATGGTGCATTTCTGAATAACGGGCATGATACTCAAGCCGAATTTAGTAAACCTGCTAAGCAACATGCTTATTCAGATGATTCAAATCACAATAGAGGTGCAAGTCCTGAAAGAAGTCCCGCTAGGAGTCCTACCAGGAATTCTGGGGAGATAAACCAAGTACGTGCTTTATTGCCTAGTCCTGGCCAAAAGGCATCTGAACCTGCTGCCTCCAAACATGGTCAGGGATTTACAAAAAGCCCTTCGCCAAATGGCATGCCTAAGCGTGTTAGGAAAGGACGTGGCTTTACTGAGCGCTATGCCTTTGCACGCAGATATCGTACTCCATCTCCAGAGCAGTCTCCCCGTACATATCGTTATGGTGATAGAAATATAAGAAGGAACTTTGATAGAAATACAAGTTACAGGCGCTCACCACCAAGACGTTTTCGAAGCCCACCAAGGGACAGGAGCCGTCCAAGATACCAAAGCAGAAGAAGTCGGAGTAGGAGCATCTCCCGCAGTCCAGTTCGTGGCCGTTTTAGAGACCGTGACCGTAGCCGGAGTCCAAGACGCAGCCTTAGTCCAGAAGACAGGCGGCCTCCCATTAGTGACAGATTAAAATCTCGGCTTGGTCCTCAAAGTGATCAACAATCTCCAGACAGAGGGAGGTCAAGGTCCAATTCTAGGAGCAATGGCTCTTCTGGCTCCAGATCCCCTGATGCTACACCACCAAAGCGTTTTGATAAAAGGACTTCTGTATCTCGTAGCAGGTCTAGATCGAGCTCTTCATCAGGACAAAAGGGTTTGGTTTCTTATGGAGATGCTAGTCCTGATTCTGGGGCTAAGTAG 2004 0.4396 MSLEKNPSVFFDVSVDGDPVERIVIELFASTVPKTAENFRALCTGEKGIGESTGKPLHYKGTCFHRILKGFMAQGGDFSRGNGTGGESIYGGKFADENFKLKHDGPGVLSMANSGPNTNGSQFFITFKRQPHLDGKHVVFGKVSKGMEILKKIEQVGTSDGKPAQPVKIVDCGEISKAKIQHTVEKEKGKRRKSGKSLTSDDDSSDKKLRGKRKKSSKNTRKRRRRYSTSDSDRDSGSDSYSSDSELDSASDSESDSDSSSSSYGKHQKRKRNNRKHGKKRKTGRNQRRRSRHSRNRRSRHKSKWSSEDSRNTVSESSSTSDSSSGDEKADRHVSGRKARADNKAQRNLDTGKQSSSLLLQSQTIPEQGMDPKVRRTVDKQSHEEGELSPENGAFLNNGHDTQAEFSKPAKQHAYSDDSNHNRGASPERSPARSPTRNSGEINQVRALLPSPGQKASEPAASKHGQGFTKSPSPNGMPKRVRKGRGFTERYAFARRYRTPSPEQSPRTYRYGDRNIRRNFDRNTSYRRSPPRRFRSPPRDRSRPRYQSRRSRSRSISRSPVRGRFRDRDRSRSPRRSLSPEDRRPPISDRLKSRLGPQSDQQSPDRGRSRSNSRSNGSSGSRSPDATPPKRFDKRTSVSRSRSRSSSSSGQKGLVSYGDASPDSGAK* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03044 667 Gene3D - 1 182 IPR029000 -
Rops8g03044 667 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 175 - -
Rops8g03044 667 SUPERFAMILY Cyclophilin-like 4 175 IPR029000 -
Rops8g03044 667 MobiDBLite consensus disorder prediction 594 625 - -
Rops8g03044 667 MobiDBLite consensus disorder prediction 226 241 - -
Rops8g03044 667 MobiDBLite consensus disorder prediction 560 590 - -
Rops8g03044 667 MobiDBLite consensus disorder prediction 181 210 - -
Rops8g03044 667 MobiDBLite consensus disorder prediction 266 301 - -
Rops8g03044 667 MobiDBLite consensus disorder prediction 242 262 - -
Rops8g03044 667 MobiDBLite consensus disorder prediction 310 324 - -
Rops8g03044 667 MobiDBLite consensus disorder prediction 545 559 - -
Rops8g03044 667 MobiDBLite consensus disorder prediction 510 544 - -
Rops8g03044 667 MobiDBLite consensus disorder prediction 211 225 - -
Rops8g03044 667 MobiDBLite consensus disorder prediction 641 655 - -
Rops8g03044 667 MobiDBLite consensus disorder prediction 181 667 - -
Rops8g03044 667 CDD cyclophilin_ABH_like 7 173 - -
Rops8g03044 667 MobiDBLite consensus disorder prediction 425 445 - -
Rops8g03044 667 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Rops8g03044 667 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Rops8g03044 667 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Rops8g03044 667 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Rops8g03044 667 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Rops8g03044 667 MobiDBLite consensus disorder prediction 325 347 - -
Rops8g03044 667 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Rops8g03044 667 MobiDBLite consensus disorder prediction 348 368 - -
Rops8g03044 667 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Rops8g03044 667 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 17 173 IPR002130 GO:0000413|GO:0003755
Rops8g03044 667 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 IPR020892 GO:0003755|GO:0006457
Rops8g03044 667 MobiDBLite consensus disorder prediction 372 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03044 Rops-Chr8 67659957 67665729 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03044 25 171 U-box Gene Family AT5G67530 46.980 1.93e-32 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03044 K09566 - gmx:100807327 760.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03044 8 67659957 67665729 Rops8g03044 8 67659957 67665729 ECH