Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03039 ATGTGTCCGGTGAGTTCCAGATTTCTCCTACCTGCTCCAGCTGCTGTAGAGGGTTTTAGAAAAATTGATCCAGATAGATGGGAGTTTGCAAATGAAGGGTTCCTCAGAGGGCACAGGCACTTGTTGGCAAACATAAGGAGAAGGAAGCAACCTCCCCAACCTACTTCTTCCCAACAAGAAGCACAACAAGGTCACTGTGTTGAAATTGGTCGTTTTGGACTTGATGAAGAGATTGATAGTTTGAGACGTGACAAGCAAGTGTTGATGATGGAGCTTGTGAAGCTTAGACACCAGCAACAGAATACTAGATCCTACATTCAAGCAATGGAGGAAAGGTTACGTGGGACAGAAATTAAGCAGCAACAAATGATGGCTTTCTTAGCTAGAGCAATGAAAAATCCAACCTTTATCCAGCAGCTACTCCAACAGAAAGAGAAGAGAAAGGAGCTAGAAGAAGCCATGACTAAAAAGAGGAGAAGACCAATTGAGCAAGGACCCAGTGGTGTTGGAGAATCAAGCAGTGGTGGTGAAGGAAGAAACAGTGTTAGAGTTGAGCATCCAGGGTTTGGGGAATATGGATTTGAAGTGTCGGAGTTGGAAGTGCTAGCTATGGAAATGCAGGGCTTTGGTAGAGGGAGGAGAGAGCACGAGGAAGAGCCTGAGGCACTAGAATCACAAGATAGGCTGAACAAGGAACTTGATGAAGGGTTTTGGGAAGAACTGTTTAGTGAGACATTTGAGGGTGAATTAGACATTCCAACTTCTCAAGGTGAACATGAAGATGTCAATGTGTTGGCCAATCGCTTTGGTTACTTGGGTTCAAGTCCTAAGGGAACTACTTGA 843 0.446 MCPVSSRFLLPAPAAVEGFRKIDPDRWEFANEGFLRGHRHLLANIRRRKQPPQPTSSQQEAQQGHCVEIGRFGLDEEIDSLRRDKQVLMMELVKLRHQQQNTRSYIQAMEERLRGTEIKQQQMMAFLARAMKNPTFIQQLLQQKEKRKELEEAMTKKRRRPIEQGPSGVGESSSGGEGRNSVRVEHPGFGEYGFEVSELEVLAMEMQGFGRGRREHEEEPEALESQDRLNKELDEGFWEELFSETFEGELDIPTSQGEHEDVNVLANRFGYLGSSPKGTT* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03039 280 Coils Coil 78 98 - -
Rops8g03039 280 Coils Coil 140 160 - -
Rops8g03039 280 MobiDBLite consensus disorder prediction 147 164 - -
Rops8g03039 280 MobiDBLite consensus disorder prediction 211 230 - -
Rops8g03039 280 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 18 173 IPR027725 -
Rops8g03039 280 MobiDBLite consensus disorder prediction 147 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03039 Rops-Chr8 67497854 67499390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03039 18 275 HSF AT3G22830 50.173 1.43e-79 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03039 K09419 - gmx:100794264 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03039 8 67497854 67499390 Rops6g01322 6 28609319 28613623 PCT