Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03037 ATGAGGACTTTCTTTTCTGCTGAATCCTGTAAAGAAACACACCCAAATGCTTTAAATCCTCAGTCTTGGCTCCATATTGAAAGAGGGAAACTTCCCAACTTGTCATCACAATCCTCTTCTGCCTCAATTGATTCTCTAATCAAGGTCCCACAGCCATCTATACTTCCGTACTTCAAACCTATTGATTATGTGGAAGTTTTAGCTCAAATCCATGAAGAACTTGAATCTTGTCCTCCACAAGAGCGATCCAATCTGTTTTTGTTACAATACCAGGTCTTTAGGGGCCTTGGAGAAGTTAAACTGATGCGCAGAAGCCTACAGGCAGCTTGGCAGAAAGCCAGCACTGTTCATGAGAAGATTATATATGGGGCATGGTTGAAATATGAGAAGCATGGGGAAGAGCAAATAGCCGACTTGCTCATGACTTGCGATAAATGTGCAAAGGAATTTAGGCCCATCGATGTAGCATCTCATCTTCCATTTGAGATAAATGCAAGTTCCCAGGAGAGATTGACCAATGAGAACCAAGGATCACAAAATGTTACTTTTAAAATTGGAAATGAAAAGATATTTTGTGATAGACTAAAAATTGCTGAACTTTCAGCACCATTTCGTGCAATGCTAAAAGGTTATTTCAGTGAATCACACTCTGAGACTATAGATTTGTCTGAAAATAATATCTCTCCTTCAGGTATGAAGGCAATAAGTTATTTCAGTTTGACTGGCAGTTTAATTGAGGTCCCTCCAAATCTTTTGTTGGAGATATTAGTTTTTGCAAACAAATATTGTTGTGAAAGACTTAAAGCTGCTTGCGATAGAAGACTTGCATCCTTAGTTTCCTCCAAAGAAGATGCTGTGGAGCTCATGGAATATGCTCTTGATGAGAATTCAGCTGTCCTTGCTGCATCTTGTTTACAAGTCCTTCTACGTGATCTTCCAATCTGTTTGAATGACAATCGGGTGGTGGAGATATTTATTCATGCTAATAGACAGCAGCTGGCAGTCATGGTTGGGCCGGGTTTATATGCACTTTTCTGTTTCTTAAGTGAAGTTTCAATGAACCTTAATTCTAGTTCAGAGACAACAGCTCATATTCTGGAAAGGCTTGTTGATTTCGCTGAGAATGACAAGCAGAGACTGCTGGGTTTACATCAATTGGGATGTGTAAGACTCTCAAGGAAAGAATATGACAAAGCACGTTTTCTTTTCGAGGGGGCTGTGAATGCAGGCCATATTTATTCCATTGCAGGTTTAGCTAGACTGGACCATATAAAGGGTGAGAAACATTTATCTTATGAGAAGCTCAGCTCAGTCATTTCATCTGTTACTCCACTTGGGTGGATGTATCAGGAAAGATCACTATATTGTGACGGTGATATGAGGTGGGAGGACCTTGAGAAAGCAAGTGATCTGGACCCTACTCTTATATATCCTTACATGTGTAGGGCTGCCTCTTTAATGAGGACACAGAATGCTCAAGCTGCACTGGCAGAAATCAATCGCATTCTTGGGTTCAAACTTTCATTAGAATGCTTGGAAATACGATTTTTTATCCATCTGGCTCTTGAGGACTACAAAGCAGCTCTGTGTGATGTTCAAACAATTCTTACCCTGCATTCAGATTATAGAATGTTTGAGGGACGTGTTGCTGCATCCCAACTCTGTACTCTTGTTCGTGAGCATGTTGAACATTGGACAACAGCAGACTGTTGGGCACGGTTATATGATTGTTGGTCTGCAGTTGATGATATTGGATCTTTATCCGTTATCTACCAGATGCTTGAATCCGATGCAGCGAAAGGTGTTCTATACTTCAGACAGTCATTGCTTCTCCTGAGGCTGAGCTGTCCTGAGGCAGCTATGCGGAGTTTACAGTTAGCTCGACAACATGCTTCAAGTGAGCATGAACGACTTGTATATGAGGGGTGGATCTTGTATGATACAGGTCATTATGAGGAAGGGCTCCAAAAAGCTGAAGAGTCTATTAGTATCAAAAGATCCTTTGAGGCCTTCTTCTTGAAGGCCTATGCATTGGCTGACTCTAGTCTAGATTCATCATGTTCTTCATCTGTTATTTCACTTCTGGAAGATGCCTTGAAGTGTCCTTCAGATAATCTGCGCAAAGTGGGAGTGCTTGAGAAAGCAAAGGAGATGAGGCTCTTCTGGGAAAAGTCAGAGGCGCTGAACAATCTAGGAAGTGTTTATGTTGACTGTGGGAAACTGGATTTGGCTGCTGATTGCTATATCAATGCCCTTAAAATCCGACACACCCGAGCCCATCAGGGTCTTGCCCGTGTTCATTGTCTCAGAAATGATAGGGCTGCTGCTTATATGGAAATGACTGAACTTATTGAGAAGGCAAAAAACAATGCATCAGCCTATGAGAAGCGCTCTGAATACTGTGATCGTGACCTGGCAAAGGCAGATCTGGAGATGGTGACTAGATTAGATCCACTTCGGGTGTATCCTTATAGATATCGTGCTGCAGTATTGATGGACAACCATAAGGAAGAGGAAGCCATTGCAGAACTCTCTAGAGCTATTGCATTTAAAGCTGATTTGCACCTCTTACATCTACGTGCAGCATTCCGTGATGAATATAAAGAGGATGTCTTAGGTGCTCTAAGAGACTGTCGTGCTGCACTCTCTGTGGATCCAAAACACCAAGAAATGTTGGAACTTCACAGTCGAGTTAATAGCCACGAGCCATCATGA 2715 0.4184 MRTFFSAESCKETHPNALNPQSWLHIERGKLPNLSSQSSSASIDSLIKVPQPSILPYFKPIDYVEVLAQIHEELESCPPQERSNLFLLQYQVFRGLGEVKLMRRSLQAAWQKASTVHEKIIYGAWLKYEKHGEEQIADLLMTCDKCAKEFRPIDVASHLPFEINASSQERLTNENQGSQNVTFKIGNEKIFCDRLKIAELSAPFRAMLKGYFSESHSETIDLSENNISPSGMKAISYFSLTGSLIEVPPNLLLEILVFANKYCCERLKAACDRRLASLVSSKEDAVELMEYALDENSAVLAASCLQVLLRDLPICLNDNRVVEIFIHANRQQLAVMVGPGLYALFCFLSEVSMNLNSSSETTAHILERLVDFAENDKQRLLGLHQLGCVRLSRKEYDKARFLFEGAVNAGHIYSIAGLARLDHIKGEKHLSYEKLSSVISSVTPLGWMYQERSLYCDGDMRWEDLEKASDLDPTLIYPYMCRAASLMRTQNAQAALAEINRILGFKLSLECLEIRFFIHLALEDYKAALCDVQTILTLHSDYRMFEGRVAASQLCTLVREHVEHWTTADCWARLYDCWSAVDDIGSLSVIYQMLESDAAKGVLYFRQSLLLLRLSCPEAAMRSLQLARQHASSEHERLVYEGWILYDTGHYEEGLQKAEESISIKRSFEAFFLKAYALADSSLDSSCSSSVISLLEDALKCPSDNLRKVGVLEKAKEMRLFWEKSEALNNLGSVYVDCGKLDLAADCYINALKIRHTRAHQGLARVHCLRNDRAAAYMEMTELIEKAKNNASAYEKRSEYCDRDLAKADLEMVTRLDPLRVYPYRYRAAVLMDNHKEEEAIAELSRAIAFKADLHLLHLRAAFRDEYKEDVLGALRDCRAALSVDPKHQEMLELHSRVNSHEPS* 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03037 904 PANTHER ETO1-RELATED 1 902 IPR044631 GO:0010105
Rops8g03037 904 Gene3D Potassium Channel Kv1.1; Chain A 162 309 IPR011333 -
Rops8g03037 904 Coils Coil 777 797 - -
Rops8g03037 904 Gene3D Tetratricopeptide repeat domain 801 902 IPR011990 GO:0005515
Rops8g03037 904 Gene3D Tetratricopeptide repeat domain 598 787 IPR011990 GO:0005515
Rops8g03037 904 Pfam BTB/POZ domain 180 274 IPR000210 GO:0005515
Rops8g03037 904 Gene3D Tetratricopeptide repeat domain 356 546 IPR011990 GO:0005515
Rops8g03037 904 SMART tpr_5 725 758 IPR019734 GO:0005515
Rops8g03037 904 SMART tpr_5 635 668 IPR019734 GO:0005515
Rops8g03037 904 SMART tpr_5 821 854 IPR019734 GO:0005515
Rops8g03037 904 SUPERFAMILY TPR-like 462 794 IPR011990 GO:0005515
Rops8g03037 904 SUPERFAMILY POZ domain 177 275 IPR011333 -
Rops8g03037 904 ProSiteProfiles TPR repeat profile. 725 758 IPR019734 GO:0005515
Rops8g03037 904 SMART BTB_4 179 279 IPR000210 GO:0005515
Rops8g03037 904 SUPERFAMILY TPR-like 722 894 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03037 Rops-Chr8 67471665 67479805 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Rops8g03037 BTB 2.8e-06 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03037 - - aprc:113861325 1535.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03037 8 67471665 67479805 Rops6g01324 6 28649339 28654120 PCT