Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03019 ATGCCAACCACATCAGCAAGAAGAAGAAGAAGCAACAATCTTAAACATCTCAACCTATGTTTCTCAAATTTGATGCAACCTTTCTTCACTCCCGAATCTCCTCCTACCACTTCCTCGTCCTTTCTTCATCAACCTGATGAAATTGATCACAACTGTCCATCACCCACCACCGCCACGTCATCAATCATGATCAAGAACTTCAACACTCTCTATGATAACCACACGTTTACCCTTTTTGAACCCGAACCCGCCGATTTCGCCACCGCCTTAACCTCCCAACGCTTCTTCTTCTCTTCCCCCGGCCGTTCCAACTCCATCGTTGAATCCACTAACACTGACACCTCCTCATCCTCATCGTCGTCGTTGATAGCCAACGGGACGCCGGCGGCGGATGAGTCCTCCGCCGCAGGCGATAACAACAAGCCAATTTTCAACGGCAGCGTGGCGGTGCCGACTTACTCGCCGGACCCTTACCTGGACTTCCGGCGGTCGATGCAGGAGATGGTGGAGGCGCGTCCAGAATTGATGAACGTGAAGTCTAATTGGGATGCGTTGCACGAGCTTCTTCTATGCTATCTTGCGCTCAATCCCAAGAGCACACACAAGTTCATTCTTCGTGCTTTTTCTGATCTTCTCGTTAGCCTAATGACGCCGCCGGAGAATCCCAATCCCAGCGGTGGCGGTGGATGTTAG 693 0.5123 MPTTSARRRRSNNLKHLNLCFSNLMQPFFTPESPPTTSSSFLHQPDEIDHNCPSPTTATSSIMIKNFNTLYDNHTFTLFEPEPADFATALTSQRFFFSSPGRSNSIVESTNTDTSSSSSSSLIANGTPAADESSAAGDNNKPIFNGSVAVPTYSPDPYLDFRRSMQEMVEARPELMNVKSNWDALHELLLCYLALNPKSTHKFILRAFSDLLVSLMTPPENPNPSGGGGC* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03019 230 ProSiteProfiles OVATE domain profile. 150 214 IPR006458 -
Rops8g03019 230 MobiDBLite consensus disorder prediction 101 140 - -
Rops8g03019 230 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 55 215 IPR038933 GO:0045892
Rops8g03019 230 Pfam Transcriptional repressor, ovate 154 215 IPR006458 -
Rops8g03019 230 NCBIfam uncharacterized plant-specific domain TIGR01568 148 216 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03019 Rops-Chr8 67256732 67257509 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Rops8g03019 Ovate 7.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03019 - - gmx:102663296 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03019 8 67256732 67257509 Rops8g03019 8 67256732 67257509 ECH
Rops8g03019 8 67256732 67257509 Rops6g01343 6 28920471 28921245 PCT