Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03007 ATGACGACCATACGAAGGTTTTGCTGCAACGATCTTCTTCGTTTTGCTTCCGTCAATCTTGACCATCTCACCGAAACTTTTAACATGTCATTCTACATGACCTATCTAGCACGATGGCCCGACTATTTCCACGTTGCCGAAGGCCCTGGAAACCGAATCATGGGTTACATTATGGGTAAAGTAGAGGGGCAAGGAGAATCTTGGCATGGTCATGTAACTGCAGTAACTGTTGCTCCGGAGTATCGCAGGCAGCAGTTAGCCAAGAAACTGATGAATCTGCTGGAAGACATCAGTGACAATATTGACAAAGCTTACTTTGTTGATCTCTTTGTGAGAGCATCAAATGCACCAGCCATCAAGATGTATGAAAAGCTTGGCTATGTGATTTATCGACGAGTGCTACGCTACTATTCTGGGGAAGAAGATGGATTAGATATGAGGAAGGCGTTATCTCGTGATGTTGAAAAGAAGTCTATCATCCCTCTTAAACGGCCAGTCACTCCTGATGAGTTAGAGTATGACTAA 525 0.44 MTTIRRFCCNDLLRFASVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVAPEYRRQQLAKKLMNLLEDISDNIDKAYFVDLFVRASNAPAIKMYEKLGYVIYRRVLRYYSGEEDGLDMRKALSRDVEKKSIIPLKRPVTPDELEYD* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03007 174 Gene3D - 2 162 - -
Rops8g03007 174 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 151 IPR000182 GO:0016747
Rops8g03007 174 CDD NAT_SF 45 97 - -
Rops8g03007 174 Pfam Acetyltransferase (GNAT) family 39 127 IPR000182 GO:0016747
Rops8g03007 174 FunFam N-alpha-acetyltransferase 20 2 161 - -
Rops8g03007 174 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 150 IPR016181 -
Rops8g03007 174 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 171 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops8g03007 Acetyltransf_1 8.3e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03007 K17972 - gmx:100306394 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03007 8 67045846 67055772 Rops8g03007 8 67045846 67055772 ECH