Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02952 ATGACCCTTTTGTTCTTTCTCTTTTCCATCCTCTTCTATTTCCCTTCACCTTCCCTTTCTGCTGATTCATGCCCCCTTAACATCACCGTCCTCCGTGTCGTTGGCGGCGGTTCCAGACCCTCCTTTGATTCCAATACCTGCCATTACATCCTCCAAGCACTTCATCTTCTCCAAGCTGATTACCTTCGCCGAATTGGCCTCTTTGTTCCTCCTCTTAACTCCTCAGAATCTTGCTGGAACAGTTTTCAATCCTTTATAAATGAATTCGATCCCAAATTTGATGTTCGATCCTCCTGTGGGTTCCAAACCTCTTGGATCTCACAGGGTTGCATGAACATCACAACAAGGCAACAATTTGAGAGCAAGGTTCCCAACACAGCACTTCAAGATGTTCAGGGAAACTGTAAACAATCCCTTGAGAATAATTCCCCTTGTGCCCTTTGCACCACCAAAATTTCCAACTCGTTATCCTATTTGACAGGAACAACTATTGGGAATGTTTCTGATTGCAGGGCTTATACCGCTATTTATGCTGCTTCTCTTTCCGATCCCACTGACCCAGGAATTGCTAAGTGCTTGTTTGGCCTTGACTTTTCGTCTTCTGGTTCTAGTGGTAAGCATAGAAAGATTGTTATTGTGGTTGTTTCGGTTTTCTGTGTGTTGAGCTTGTTAATATTTTGTGGGGTTTGGGGTTATTTGAGATGGAAGCGGAAGAAGATGATAAAAAATAAGGGTATAGGTAAAACTGAGATGGGCGTTGTTTCTGGGTTGGATTCGATGAATCAGAGTACAACTTTGATTAGGTTCACTTTTGATGAGATTAAGAAGGCAACTAGGAACTTCTCAAGGGATAATATGATTGGGAGTGGTGGTTATGGGAATGTTTATAAAGGGATCTTGTTGGATGGAACTCAAGTTGCATTGAAAAGGTTTAAGAATTGTTCAGTTGCTGGGGACACAAGTTTTACTCATGAAGTTGAGGTTATTGCAAGTGTTAGGCATGTGAACCTTGTTGCTCTAAGAGGTTACTGTACTGCTACTACTAATTTAGAAGGTCACCAGAGGATTATTGTTACTGATTTAATGGAGAATGGGAGTCTTTATGATCATTTATTTGGTTCTGCAAAGAAGAAACTAAGTTGGCCAATTCGTCAAAAGATTGCTCTAGGAACTGCTAGGGGTTTGGCTTATTTGCATTATGGGGCACAGCCTTCAATTATCCATAGGGACATTAAAGCTAGTAACATACTTTTGGATGAGACGTTTGAAGCAAAGGTAGCGGATTTTGGGTTAGCAAAATTCAACCCTGAAGGAATGACACATATGAGTACTAGAGTAGCTGGAACTATGGGTTATGTTGCTCCTGAGTATGCTTTGTATGGACAATTAACAGACAGGAGTGATGTCTTTAGTTTTGGTGTTGTGCTTCTTGAGCTTTTAAGTGGGAAAAAGGCTCTTCAATCAAATGATGATGGTGAACCTTCTGCTCTCACTGACTTGGCTTGGTCATTAGTTAGAAATGGTAGTCCTTTGGATGTTATTGAAGATGGTATGCCAGAAGCTGGTCCACCAGAAGTTCTTGAGAAATACGTGTTGGTTGCTGTACTGTGTTCTCATCCTCAATTATATGCTAGGCCAACAATGGATCAAGTTGTTAAAATGCTTGAGACAGATGAATCAGTACCCTCAATAATGGAAAGGCCAATTCCTTTTATTGCTGGAAGACTTGATATTGAGAAATCTGCTAGTGGTAATAACTCGGGTCAGCTATGTAGTCCAACGGGTTATCAAGCATATACATTGCAACAAAGTCACCGGCCTTCTGTTTGTGAGGAAGAAGAAGAAGGAAGTTCGGCATCTGGGACTGTGAGCAAAGATTGA 1881 0.4131 MTLLFFLFSILFYFPSPSLSADSCPLNITVLRVVGGGSRPSFDSNTCHYILQALHLLQADYLRRIGLFVPPLNSSESCWNSFQSFINEFDPKFDVRSSCGFQTSWISQGCMNITTRQQFESKVPNTALQDVQGNCKQSLENNSPCALCTTKISNSLSYLTGTTIGNVSDCRAYTAIYAASLSDPTDPGIAKCLFGLDFSSSGSSGKHRKIVIVVVSVFCVLSLLIFCGVWGYLRWKRKKMIKNKGIGKTEMGVVSGLDSMNQSTTLIRFTFDEIKKATRNFSRDNMIGSGGYGNVYKGILLDGTQVALKRFKNCSVAGDTSFTHEVEVIASVRHVNLVALRGYCTATTNLEGHQRIIVTDLMENGSLYDHLFGSAKKKLSWPIRQKIALGTARGLAYLHYGAQPSIIHRDIKASNILLDETFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTDRSDVFSFGVVLLELLSGKKALQSNDDGEPSALTDLAWSLVRNGSPLDVIEDGMPEAGPPEVLEKYVLVAVLCSHPQLYARPTMDQVVKMLETDESVPSIMERPIPFIAGRLDIEKSASGNNSGQLCSPTGYQAYTLQQSHRPSVCEEEEEGSSASGTVSKD* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02952 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 406 418 IPR008271 GO:0004672|GO:0006468
Rops8g02952 626 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 242 360 - -
Rops8g02952 626 ProSiteProfiles Protein kinase domain profile. 281 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g02952 626 Pfam Protein tyrosine and serine/threonine kinase 284 555 IPR001245 GO:0004672|GO:0006468
Rops8g02952 626 Pfam SPARK 20 170 IPR043891 -
Rops8g02952 626 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 122 600 - -
Rops8g02952 626 Gene3D Transferase(Phosphotransferase) domain 1 362 565 - -
Rops8g02952 626 ProSitePatterns Protein kinases ATP-binding region signature. 287 309 IPR017441 GO:0005524
Rops8g02952 626 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 362 563 - -
Rops8g02952 626 SUPERFAMILY Protein kinase-like (PK-like) 256 556 IPR011009 -
Rops8g02952 626 CDD STKc_IRAK 287 556 - -
Rops8g02952 626 Gene3D Phosphorylase Kinase; domain 1 247 360 - -
Rops8g02952 626 MobiDBLite consensus disorder prediction 602 626 - -
Rops8g02952 626 SMART serkin_6 281 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02952 Rops-Chr8 66216128 66218277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02952 1 601 Receptor kinase-like Gene Family AT2G48010 62.233 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Rops8g02952 PK_Tyr_Ser-Thr 1.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02952 - - gmx:100786298 974.156