Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02935 ATGGACAAGAGTGAGAGAGAGAACCATGACTTTGTTAACGTTGATTCTTTCTCTAAGCTCCCCTTTATCCGCCCTACAGCACCTACCAAAGAAAAGGGAATTCGACTCTTTGGCATAAAATTCGGTGACGCCGGTGAGTCCGAGTCGACGGAGACAGCCGACAACAACAATAATGCTTTGGAGCTTGATGGTAGCAATAACAACACACAGAATGGTGAGAGTGGTCGCAGATTTGAATGCCATTACTGTTGTAGAAACTTTCCCACTTCTCAGGCCTTAGGTGGCCACCAAAATGCTCACAAACGAGAAAGGCAGCATGCCAAACGAGCACACCTTCACTCAGCTATGTTTCATGGTAGCCTCTCTGATGCTCATGTGTATGGCCTCATGAACAACAGGTATGGTTCTGCTTCATCGACGGCAACAATGTCTTATACAACATGGAATAGGAATTATAGCAACTCATCAAGTACTATGATGCCGAGCACTGGTGGTGGAAGGTGCCATGGAAGCTCCTACTCACATCAAAGGCCCATTAGTGGTAGCCCCTTGGGCTTGTGGCGAATCCCCAATGCCACCGGTGTTGTCCAAAGAAACCCTATTTTCAACCATGAACGCTCGTTGCCTTTGTTAGCTAGTGAGGAAATGAACACGAGGATGGGGCCCTCACGGGTCGGTTCCTCTGGTTCACAAAACCGGTATGTTTATGATTCCAAACCCAGCGTAAACGACCATGTAAGTTTGGATCTTCGTCTGTAA 759 0.473 MDKSERENHDFVNVDSFSKLPFIRPTAPTKEKGIRLFGIKFGDAGESESTETADNNNNALELDGSNNNTQNGESGRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLHSAMFHGSLSDAHVYGLMNNRYGSASSTATMSYTTWNRNYSNSSSTMMPSTGGGRCHGSSYSHQRPISGSPLGLWRIPNATGVVQRNPIFNHERSLPLLASEEMNTRMGPSRVGSSGSQNRYVYDSKPSVNDHVSLDLRL* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02935 252 MobiDBLite consensus disorder prediction 48 72 - -
Rops8g02935 252 ProSiteProfiles Zinc finger C2H2 type domain profile. 78 105 IPR013087 -
Rops8g02935 252 MobiDBLite consensus disorder prediction 220 238 - -
Rops8g02935 252 MobiDBLite consensus disorder prediction 219 240 - -
Rops8g02935 252 PANTHER ZINC FINGER PROTEIN GIS 1 252 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Rops8g02935 252 SUPERFAMILY beta-beta-alpha zinc fingers 75 106 IPR036236 -
Rops8g02935 252 ProSitePatterns Zinc finger C2H2 type domain signature. 80 100 IPR013087 -
Rops8g02935 252 MobiDBLite consensus disorder prediction 45 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02935 Rops-Chr8 65657167 65658440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02935 1 252 C2H2 Transcription Factor Family AT2G41940 42.336 2.94e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02935 - - jre:109011926 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02935 8 65657167 65658440 Rops8g02935 8 65657167 65658440 ECH