Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02934 ATGGGTTTCGTACGAGTCATCTCCAGCAGTATAGTGAAAGCACCGAGTGACAATAACGGTGACACAACTCGAAAAATCGAATTAACCCCTTTGGAACTCCAATTCATCGCATATGGAGGCATCCAAAATGGGCTTCTTTATCACTATCCATCAGGAATCACACCAAACCAAATCGAACACTTGAAACACTCCTTCTCCTCCACTCTTGCCTTTTTCCCACCATTCGCAGGCCGTTTCATGATACCCAAACACGAAGACAACACCAGTTCCACTTTCGTCGTTTTCAACAATGAAGGTGCATTGTTTGTCCATGCCAAAGCAGAGAACACTACCGTTGCTGATATCCTTGAACCCAAGTACGTTCCTCTCATTGTCCATTCCTTCTTTGCACTCAACGATACAGTAAACTATAAAGGCACATCACAGCCATTGCTTGCAGTGCAAGTCACTGAGCTAGTTGACGGCGTCTTCGTCGGGGTCACCATCAACCATGGTGTTGCCGACGGCAAGTCAATGTTCCATTTCATCAATTCTTGGGCTGAAATATCACGGGGTTGTTCTAAAATATCCAAACCCCCTGAATTTGAACATTGGTTTCCCGATGGAATTGACCGTCCCATAAGGTATCCTTTGAAAATGGACATTGAAGAAGAGAGGAGACAAGTTGAAAGCCCAAAACAACCTGAGAGGGTCTTCCATTTCACCAAGGAGAAAATCGCGCAACTCAAATCGAGAGCTAATGCTGAAGCTGGCACCAACAAAATATCTTCTCTGCAAGCGCTTTTAACTCATGTTTGGCGCTCTGTGATTCGTTGCAAAGGAGTTGACCCAGAAGAAGAGGTTCGTTCTCTCTTGATGATAGATGTTAGACACAGGATGGATCCACCATTGCCAGAGTTTTATTTTGGAGTTGCGGTGCTGAATGGAAGTTTCACAATGAAAGCATGGGAGCTATTGGAGGAGGGTGGGCTTGGTAAGGGTGCTTTGAGGATGAACGAGATGATTGCTTTGCATAATGATCAGCTGGTGAAGAACGTCTATGAATCTTGGTTGAGAAAGCCATGGTTTTTTACGCTGAGTAGCATGACTGGTAGTAATAACTTGGTTACCAGCTTATCTCCGAGGTTTGATTATTATGGTAATGATTTTGGTTGGGGAAGGCCTGTGGCAGTTCGAAATGGCGGTGCGAATAAAAAAAATGGAAAGCTTATAGTGTTTGAGGGGGCAGAAGAAGGTAGTATTGACCTTGAAGTGTGCCTTCCTCGTGAGATTTTGGAGGGCATGGGAAATGATCACGAGTTCATGAATGCCGCTTCCAACTAA 1323 0.446 MGFVRVISSSIVKAPSDNNGDTTRKIELTPLELQFIAYGGIQNGLLYHYPSGITPNQIEHLKHSFSSTLAFFPPFAGRFMIPKHEDNTSSTFVVFNNEGALFVHAKAENTTVADILEPKYVPLIVHSFFALNDTVNYKGTSQPLLAVQVTELVDGVFVGVTINHGVADGKSMFHFINSWAEISRGCSKISKPPEFEHWFPDGIDRPIRYPLKMDIEEERRQVESPKQPERVFHFTKEKIAQLKSRANAEAGTNKISSLQALLTHVWRSVIRCKGVDPEEEVRSLLMIDVRHRMDPPLPEFYFGVAVLNGSFTMKAWELLEEGGLGKGALRMNEMIALHNDQLVKNVYESWLRKPWFFTLSSMTGSNNLVTSLSPRFDYYGNDFGWGRPVAVRNGGANKKNGKLIVFEGAEEGSIDLEVCLPREILEGMGNDHEFMNAASN* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02934 440 Gene3D - 211 429 IPR023213 -
Rops8g02934 440 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 436 - -
Rops8g02934 440 Pfam Transferase family 41 435 - -
Rops8g02934 440 Gene3D - 2 209 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02934 Rops-Chr8 65637279 65638875 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02934 61 423 Monolignol Biosynthesis Gene Families AT5G48930 25.773 6.60e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02934 - - gmx:100500257 510.76