Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02926 ATGTTGTGCTGTGGAGGTGATGAGGAGGAGAGCAGTGGTCCCCCTGCAAACCAATACACTGCACCATCTAGAGGGGGTCAAACATATGGTGGAGGAGGAGGCAATGATAGAGGAGAGCCAAGGGGCAACGTTGCCAAGAGTGGTGCTCCACAGAAAGTATTACCAATTGAGATACCCGCTATGCCATTGGATGAATTAAATAGGTTAACAGGAAACTTTGGTTCTAAGGCTTTTATTGGTGAAGGTTCCTATGGAAGGGTTTACTATGCAAAATTAAGTGATGGAACTGATGCTGCAATTAAGAAGCTGGATACCAGTTCGCAAGAACCTGACAATGACTTTGCGGGTCAGTTATCAGTTGTTTCAAGACTGAAGCATGAAAATTTTGTGGAGTTGATTGGATATTGTCTAGAGGCAGACAACAGAATTTTGGTTTATCAATATGCAAGTTTGGGTTCTTTGCATGACATATTACATGGAAGGAAGGGTGTACAAGGGGCTGAACCTGGTCCAGTTTTAAGCTGGAACCAGAGAGCAAAAATTGCATTTGGTGCAGCAAAAGGACTTGAGTTTCTTCATGAAAAGGTTCAGCCTTCTATAGTTCATCGTGATGTTAGATCCAGCAATGTCTTACTGTTCAATGACTATGAGGCCAAGATTGCTGATTACAGCTTGACAAATCAGTCTTCTGACACAGCAGCTCGGCTACATTCAACAAGAGTTTTAGGAACATTTGGCTATCATGCTCCAGAGTATGCCATGACTGGACAGATAAACCAGAAAAGTGATGTTTATAGTTTTGGGGTTGTGCTTTTAGAACTCTTGACAGGAAGAAAGCCAGTAGATCACACAATGCCCAAAGGGCAACAAAGTCTTGTGACTTGGGCAACTCCAAGGTTGAGTGAGGACAAAGTGAAACAATGTGTGGATCCTAAGCTAAACAATGAATACCCACCAAAGGCTATTGCTAAGTTGGCAGCTGTTGCAGCACTTTGTGTTCAATATGAAGCTGATTTCAGGCCAAACATGACAATTGTTGTCAAAGCTCTTCAGCCACTTCTGAATGCAAAACCGGCTGGTCCCGACTCTAATGCTTGA 1098 0.4308 MLCCGGDEEESSGPPANQYTAPSRGGQTYGGGGGNDRGEPRGNVAKSGAPQKVLPIEIPAMPLDELNRLTGNFGSKAFIGEGSYGRVYYAKLSDGTDAAIKKLDTSSQEPDNDFAGQLSVVSRLKHENFVELIGYCLEADNRILVYQYASLGSLHDILHGRKGVQGAEPGPVLSWNQRAKIAFGAAKGLEFLHEKVQPSIVHRDVRSSNVLLFNDYEAKIADYSLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQINQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNEYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNAKPAGPDSNA* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02926 365 FunFam PTI1-like tyrosine-protein kinase 3 150 359 - -
Rops8g02926 365 Pfam Protein tyrosine and serine/threonine kinase 78 350 IPR001245 GO:0004672|GO:0006468
Rops8g02926 365 PIRSF ILK 39 358 - -
Rops8g02926 365 MobiDBLite consensus disorder prediction 1 51 - -
Rops8g02926 365 SUPERFAMILY Protein kinase-like (PK-like) 52 350 IPR011009 -
Rops8g02926 365 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Rops8g02926 365 FunFam probable protein kinase At2g41970 46 148 - -
Rops8g02926 365 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 2 358 - -
Rops8g02926 365 Gene3D Phosphorylase Kinase; domain 1 42 148 - -
Rops8g02926 365 ProSitePatterns Tyrosine protein kinases specific active-site signature. 200 212 IPR008266 GO:0004672|GO:0006468
Rops8g02926 365 SMART tyrkin_6 73 350 IPR020635 GO:0004713|GO:0006468
Rops8g02926 365 Gene3D Transferase(Phosphotransferase) domain 1 150 360 - -
Rops8g02926 365 ProSiteProfiles Protein kinase domain profile. 73 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02926 Rops-Chr8 65471938 65475361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02926 37 357 Receptor kinase-like Gene Family AT3G58690 42.769 1.18e-85 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Rops8g02926 PK_Tyr_Ser-Thr 8.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02926 - - gmx:100812507 666.381