Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02905 ATGGTTTCATGGTTTAAAAAGATTCTTCATATGTTCAAGAGCAGGCATGATGATCTTAATGAAAACCCTGACCCTAACATGTGGAGTAGGGATCAAGAGTGGCATTCCAGTGGTGAATTCTCCTTCGCTGTGGTTCAGGCCAATCAGAATCTTGAGGATTTCAGCCATGTTGTGACTGGCTCTAGGGCAATCTTTCTTGGAGTTTATGATGGCCATGGTGGTGTAGAGGCTTCTCGGTTCGTCAGAAATAACCTTTTCGACCATGTAATAAGTGCGTTTTCTGGGATTCTTTGCATGTTTCTGGTTTCTTTTGGGAATATTCAGGAGAAGCGTACTATATCTTCAGAAGTTCTCAGGGCTGCTGTTGCTGCAACCGAGCAAGGGTTCATGGATGTTACTAGAATGGGTTATAGCTTAAAGCCAGAAATAGTTGAAATGGGTTCCTGTTGTCTGGTTGGTGTTATCTGGAAAGGGACACTATATATCGCCAACCTTGGAGACTCCCGTGCTGTAATTGGTTCTCTGAATCGGTTTAACAAGATAGTTGCTAAGCAGTTGACCAAAGACCACAATGCTAATAACGAGGAAATCAGACAAGAACTCATGCAATTGCACCCCGATGATCCAGGAATTGTGCTTCCCGATGATGGAACATATCGTGTTAAAGGCCTCATCCAGGTATCCAGAACTATAGGAGATGCATATTTGAAGCTGCCACCATTCTCTTCAGAGCCAGGATTCCCACGGAACAACCATGTGCCTCCACCTTTCAACCGAGCTGTACTATCAGCAGAGCCAGCTCTATATACAAGAGTTTTAAAACGCAAAGATAGATTCCTTATCTTTGCATCTGATGGACTTTGGGAACTCTTGACAAATCAGGAAGCAGCTGAGATTGTTCACAAGAATCCACGAATTGGAATAGCAAGAAGACTTATTAAGGCTGCTCTAAAGGTAGCAGCTAGTAGAAGGAACACTGAATATAGAACCCTTACTAGGATTGAGGCTGGAAGAGACAGAAGGCGGACTTATCATGATGATATCACAGTTATTGTTGTTTTCATAGAGCATCAGTTGCTTATGACTAGAGCCAATATGCCAGTGTCGTCCATCAAAGGGTTTGATAACACGGCTGATTCATCAAGTTTTAATAGGGTTGAGGAATTCATGTGA 1173 0.428 MVSWFKKILHMFKSRHDDLNENPDPNMWSRDQEWHSSGEFSFAVVQANQNLEDFSHVVTGSRAIFLGVYDGHGGVEASRFVRNNLFDHVISAFSGILCMFLVSFGNIQEKRTISSEVLRAAVAATEQGFMDVTRMGYSLKPEIVEMGSCCLVGVIWKGTLYIANLGDSRAVIGSLNRFNKIVAKQLTKDHNANNEEIRQELMQLHPDDPGIVLPDDGTYRVKGLIQVSRTIGDAYLKLPPFSSEPGFPRNNHVPPPFNRAVLSAEPALYTRVLKRKDRFLIFASDGLWELLTNQEAAEIVHKNPRIGIARRLIKAALKVAASRRNTEYRTLTRIEAGRDRRRTYHDDITVIVVFIEHQLLMTRANMPVSSIKGFDNTADSSSFNRVEEFM* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02905 390 SMART PP2C_4 31 353 IPR001932 -
Rops8g02905 390 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Rops8g02905 390 ProSiteProfiles PPM-type phosphatase domain profile. 39 355 IPR001932 -
Rops8g02905 390 CDD PP2Cc 40 355 IPR001932 -
Rops8g02905 390 Gene3D - 18 365 IPR036457 -
Rops8g02905 390 SUPERFAMILY PP2C-like 44 356 IPR036457 -
Rops8g02905 390 PANTHER PROTEIN PHOSPHATASE 33 353 IPR015655 GO:0004722|GO:0006470
Rops8g02905 390 Pfam Protein phosphatase 2C 61 320 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02905 Rops-Chr8 65200624 65203017 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02905 27 384 PP2C-type Phosphatase Gene Family AT5G06750 55.923 1.36e-137 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02905 K01102 - gmx:100806476 422.165