Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02903 ATGTTTCCGTGGCTTCAAAAGGTTCTTTGTGCATGCATTCATGATGATATTGATGATGACCCTGACGATCTCATGTGGAGTAGGGCCCTGGAGAAGCATTCCTGTGGTGAATTCTCCTTCGCTGTGGTTCAGGCCAATCAGAATCTTGAGGATCACAGCCAGGTTGAAACCGGTACCAATGCAATCTTCGTCGGAGTTTACGATGGCCATGGCGGTGTAGATGCTTCCCTGTTCGTCAGAAATAACCTCTTCAGCCATGTACTTGGGGCTATTCCGGACAATGGTACTATGTCTGAAGAAGTTCTCAGGGATGCTGTTGCTGCTACTGAGCAACAGTTCATGGAACTTAATCAACAGGATTATCGAACAAGGCCAGAAATAGTTAAAATAGGTTCTTGTTGTCTGGTTGGTGTAATCTGGAATGGGACACTATATATCGCCAACCTTGGAGACTCCCGTGCTGTAATTTGCTCTGTGGATCAATTGAACAGGATAATTGCTCAGCAGTTGACCAGAGACCACAATGCTAATAATGAGGAAATTCGACAAGAACTCATCCAATTGCATCCTGATGATCGGAATATTGTGTTTCACAATAATGGAGCATGGCGCGTTAAAGGCCTCATCCAGGTATCCAGAGCTATAGGTGATGCATATTTGAAGCGTCCAGAGTTCGCTTCAGATCCAGCATTCCCACAGAACTATGTGCCTCCACCTTTTGACCGAGCTGTGCTGTCAGCAGAACCAGAACTACTTACAAGAGTTATACAAGGATCAGATAGATTCCTTATCTTTGCATCTGATGGACTTTGGGAACTCTTGACAATTCAGGAAGCAGCTGAGATTGTTCATAAGAATCCACGAAATGGAATAGCAAAGAGACTTGTTAAGGCTGCTCAAAAGGTGTCAGCTAGTAGAAGGGACACTTCATATAGACGCCTTAGGAGGGTTGAGGCGGGAAGAGACAGAAGGCGCACTTATCATGATGATATCAGTGTAATTGTTGTCTTCATAGATCATGAGTTGCTTAACAATACAGCCACTGTACGAGAGACTGTACCAGCATTGTCCTTCAAAGGGTTCGATGACTTGGTTGTTCCATCAAATTTTGATAATGTCGCTCAATTTCTGGGGACACAAGACTTAAGTGTAGTAGTTTAG 1161 0.441 MFPWLQKVLCACIHDDIDDDPDDLMWSRALEKHSCGEFSFAVVQANQNLEDHSQVETGTNAIFVGVYDGHGGVDASLFVRNNLFSHVLGAIPDNGTMSEEVLRDAVAATEQQFMELNQQDYRTRPEIVKIGSCCLVGVIWNGTLYIANLGDSRAVICSVDQLNRIIAQQLTRDHNANNEEIRQELIQLHPDDRNIVFHNNGAWRVKGLIQVSRAIGDAYLKRPEFASDPAFPQNYVPPPFDRAVLSAEPELLTRVIQGSDRFLIFASDGLWELLTIQEAAEIVHKNPRNGIAKRLVKAAQKVSASRRDTSYRRLRRVEAGRDRRRTYHDDISVIVVFIDHELLNNTATVRETVPALSFKGFDDLVVPSNFDNVAQFLGTQDLSVVV* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02903 386 ProSiteProfiles PPM-type phosphatase domain profile. 37 338 IPR001932 -
Rops8g02903 386 Coils Coil 99 119 - -
Rops8g02903 386 Pfam Protein phosphatase 2C 56 303 IPR001932 -
Rops8g02903 386 SMART PP2C_4 31 336 IPR001932 -
Rops8g02903 386 SUPERFAMILY PP2C-like 41 339 IPR036457 -
Rops8g02903 386 ProSitePatterns PPM-type phosphatase domain signature. 63 71 IPR000222 GO:0043169
Rops8g02903 386 FunFam Probable protein phosphatase 2C 42 28 346 - -
Rops8g02903 386 CDD PP2Cc 38 338 IPR001932 -
Rops8g02903 386 Gene3D - 23 349 IPR036457 -
Rops8g02903 386 PANTHER PROTEIN PHOSPHATASE 34 339 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02903 Rops-Chr8 65082065 65084987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02903 24 371 PP2C-type Phosphatase Gene Family AT5G06750 56.534 3.33e-139 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02903 K01102 - gmx:100806476 443.736