Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02902 ATGGGAATGGAGAGAGTGCAAAGCTCCTATGAGCCCTTGGATGAAGCGTTCGAAATTGGGAAAGAGACGTATCGTGGGCAACAATACAGTCAAATATACTTCGCTCGCCTCCACTTGATGAGAACTCTCTTGTATTCCCTTGTCCCCAATCGGAAACCCCATTTTCCTGTATGCACAGTGTTGGAATTGGAAGAGGGCAAGGAGTGTGTCATTGTTGGAACCCTCTATAAACACATGAAGCTTAAACCTTGCATACTTGATGAGTATTCTAAGCAGAGATCGGTGGTTCCACTCGTCAAGCCGCATAACTTTGTGCACCAGGATGATTATCTAGTTTTGGAAGATGAAAGCGGGAGAGTTAAGCTCGGTGGGAACCACATTTCACCATCTGTCTATGTAACAGGAATTGTGGTTGCTTTACATGGAAAGGAAACTGGGGCAGGTGATTTTTTGGTTCAGGATGTTCTAGAAGCTGGCTTACCACCACAGATAGAATTTCCCCTTAAATCAAGGGAAGACAAATATGTTGTTTTTGTGTCAGGATTAAGTGTTGGGAGCAGCAACTCTAATCCTCTTCAGATTCAGCTTCTCATTGATCATATTACTGGGCATTTAGGAGATGAGAAGGAGCAAAGTATTGCATCGCAAATTGTTCGTGTAGTCATTGCTGGAAATTCTGTTGAGATACCACGTGGACTTCTTAATGGACAGAATTTGGCCTCAAAGGATCTCTCAAGGATGGCTGAACCAATAAAGGAGCTAGATATTCTGTTGAATCAGATTGCTGCTGGTTTGCCTTTGGATATCATGCCAGGACCCAGTGACCCTGCTAATTTCTCATTACCACAGCAGCCGTTGCATAGATGCCTTTTCCCTGGGTCATCAGCATATAACACTTTTAGATCTTGTACAAATCCTCATAGTTTTGAGCTTGATAATATCAGGTTTCTTGGGACATCGGGTCAGAATGTAGATGATCTTGAGAAGTATTCAGAGGCAAAAGATAAACTTGAATTCATGGAAAGGACATTAAGATGGAGGCATTTGGCACCCACTGCACCTAATACTCTTGGGTGCTATCCTTATACTGATAGGGATCCTTTCTTCATTGAGAGCTGTCCTCATGTGTACTTTACTGGCAACCAGGATAAATATGACACTCGTGTGATAAAGGGACCAGAAGGGCAGTTGGTGAGACTCATATGCGTTCCTAAATTCAGTGAAACTGGAGTTGCTGTTATGTTAAATCTGAGGGATCTTGAATGTCATGCTCTTAGTTTTGGAACTCAGTTCAGCTCATAA 1302 0.427 MGMERVQSSYEPLDEAFEIGKETYRGQQYSQIYFARLHLMRTLLYSLVPNRKPHFPVCTVLELEEGKECVIVGTLYKHMKLKPCILDEYSKQRSVVPLVKPHNFVHQDDYLVLEDESGRVKLGGNHISPSVYVTGIVVALHGKETGAGDFLVQDVLEAGLPPQIEFPLKSREDKYVVFVSGLSVGSSNSNPLQIQLLIDHITGHLGDEKEQSIASQIVRVVIAGNSVEIPRGLLNGQNLASKDLSRMAEPIKELDILLNQIAAGLPLDIMPGPSDPANFSLPQQPLHRCLFPGSSAYNTFRSCTNPHSFELDNIRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPYTDRDPFFIESCPHVYFTGNQDKYDTRVIKGPEGQLVRLICVPKFSETGVAVMLNLRDLECHALSFGTQFSS* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02902 433 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 5 427 IPR024826 -
Rops8g02902 433 Pfam DNA polymerase alpha/epsilon subunit B 176 385 IPR007185 GO:0003677|GO:0006260
Rops8g02902 433 Pfam DNA polymerase delta subunit OB-fold domain 28 155 IPR040663 -
Rops8g02902 433 FunFam DNA polymerase delta small subunit 160 433 - -
Rops8g02902 433 CDD MPP_PolD2_C 175 427 IPR041863 -
Rops8g02902 433 Gene3D - 34 158 - -
Rops8g02902 433 Gene3D - 167 432 - -
Rops8g02902 433 FunFam DNA polymerase delta subunit 2 34 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02902 Rops-Chr8 65072009 65078412 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02902 4 432 Core DNA Replication Machinery Family AT2G42120 77.622 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02902 K02328 - gmx:100780072 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02902 8 65072009 65078412 Rops8g02902 8 65072009 65078412 ECH