Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02886 ATGTACGGAACTCAATGGGAACCCCACATGGGAATTATTAGCAACCAGTTGAGTTTTGAGACCATGAAATCACCCTGCAACATTGTGACAACAACTCATCTTCAAACACCAGTAGTTTTTGGGGCTAGTGAAGCCAAAAGCCTTGTGAGCTTTCAAGCTCAAGAACATGATCAGCACCAGATTGAAGTTCCAGCTTGGTGCTTTGAGTTTCCAAAGATACCAGCCTCTCCCACGATGATTTGCCAACATGAATTCACCAATACCACTACTAAACAAGATCCACCCACCTCTCAATTCACAAGCTCCTCGTACTCGGTTGCTGAATCTTTCTTGTCTAGTACTGCAGATATATATAGTCATTCTTCTTCTGAAAAATATAGTAGTTTTCAGGCTAGAAATATGCCATTTTATGATCACTTTCCACAAGAACATGATAAATTAGTGAGGGATGAAGCTGCCAGAGATGAGAGGCTTCGTGAAATTTCCTTTCAGAGAAATCAGTTGGCCTCACGTATAAAGCCAGAAAAGCAGGATCCTAGACACTGTGGGGTTGCCTGTGTCACTTCTTGCAACTCTGCTTCTAGAAGTAAAAGAAGAATAAGATGGACCAAAGATCTGCATGAGCCATTTATGGTGATTGTTAATCGCCTAGGTGGTCCAGAAAAGGCAAAGCCTAAGGCTATACTAGAGATGATGAAATCGAATTTGCTGTCCATTTCTCATGTTAAAAGTCATTTGCAGAAATGTAGGTCTACAATACACATACAGAAAACGTTGCAGGAAAGATCTGAGGAAAGACAAAGAACAGATGGTGTCACTGAGCTTCCAGTCAAAATACTTATGCAAATTGAGGAATCAAAGCAATTGCAACTAGAGGTCCGGAGGAGTATTTCCCAACAAATGGAGATGCAACGAAATTTGCAAATGCTAATAGAACAGCAGAACAAGAAGCTCAAAGCACTGTTAGATCACCAAAAAGAAGGAACCAAATTGAAGAAAATCCTTGACACAGAACTGGAAGTGACTTTCCCCAGATGA 1038 0.4085 MYGTQWEPHMGIISNQLSFETMKSPCNIVTTTHLQTPVVFGASEAKSLVSFQAQEHDQHQIEVPAWCFEFPKIPASPTMICQHEFTNTTTKQDPPTSQFTSSSYSVAESFLSSTADIYSHSSSEKYSSFQARNMPFYDHFPQEHDKLVRDEAARDERLREISFQRNQLASRIKPEKQDPRHCGVACVTSCNSASRSKRRIRWTKDLHEPFMVIVNRLGGPEKAKPKAILEMMKSNLLSISHVKSHLQKCRSTIHIQKTLQERSEERQRTDGVTELPVKILMQIEESKQLQLEVRRSISQQMEMQRNLQMLIEQQNKKLKALLDHQKEGTKLKKILDTELEVTFPR* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02886 345 SUPERFAMILY Homeodomain-like 195 252 IPR009057 -
Rops8g02886 345 Pfam MYB-CC type transfactor, LHEQLE motif 281 327 IPR025756 -
Rops8g02886 345 Gene3D - 196 253 - -
Rops8g02886 345 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 189 327 IPR044848 GO:0003700
Rops8g02886 345 NCBIfam myb-like DNA-binding domain, SHAQKYF class 197 251 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02886 Rops-Chr8 64807433 64810033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02886 184 328 G2-like Transcription Factor Family AT4G28610 41.497 2.17e-29 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Rops8g02886 Myb_CC_LHEQLE 5.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02886 - - gmx:102662952 385.956