Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02864 ATGGTTGATTACCCGGGCTATATCCTACTTTTTATCATATGGCTAGTGTCCACAATCGTGGTTAGAGCCATACTACTCACTAGAAAACTGAAAAAGGCTCATCTACCACCAAGCCCAGTAGCCTTACCCATCATTGGACACCTTCACCTTCTTGCTCCAATACCTCACCAGGCCCTTCACAAGCTCTCGACCCGCTATGGACCCATAATGCAACTTTTCCTTGGTTCTGTCCCTTGTGTAGTAGCTTCTACACCAGAAACTGCAAGAGAGTTCCTTAAAACTCAGGAAGCCCACTTCTCCAACCGTCCTCAAAATTCTGCAGTTGATTATCTAACATATGGCTCCCAAGACTTCTCCTTCGCCCCATATGGACCTTATTGGAAATTCATGAAGAAAACAATCATGTCTGAACTTCTGGGTGGTCACACACTCTTACAGCTTCTTCCTGTGAGGAGACAAGAGACAACAAGGTTTCTGAGACTTTTGCTCGAGAAAGGGAAGGCAGGTGAGGCCATCAATGTTGAAGATGAACTGTTGACACTATCGAATCACGTTGTGTCAAGGATGATTATGGGCCAAACAAGCTCTGAAAATGATAGTGAAGCAGAAGAGGTGAGGAAGTTGGTGCAAGACACAGCACATCTCACTGGGAAGTTTAATGTTTCGGACTTTATTTGGTTCTTTAAGAACTGGGATGTGCAGGGGTTCAGCAAAAGGCTCAAGGAAATTCGAGACAGGTTTGACACCATGATGGAGAAGGTGATCAAGGAGCATCAAGAGGAAAGGAGGAAAAGAAAGGAACTTGGTGGAGGAGATGGTCATATCAAGGATCTACTTGATATATTATTGGACATATTTGAAGATGAGAACTCTGAAATAAAGTTGACAATGGAGAACATAAAGGCCTTCATCATGGACATATTTGTGGCAGGAACCGACACTTCAGCCTTAACTATTGAATGGGCTCTGGCAGAGTTGATTAACCACCCACATGTGATGGAGAGAGCAAGACAAGAGATCAACGCCGTAATTGGAGATAGTAGAATAGTAGAAGAATCAGACCTTGTCAACCTTCCTTACCTGCAAGCTATAGTCAAAGAAACACTGAGGATTCACCCCACAGGTCCAATGATTCCAAGAGAATCAACTGAAAGGTGCACCATCTTGGGCTATGAGATTCCAGCAAGGACCCAGTTGTTTGTTAATGTGTGGGCTATTGGTAGGGACCCCAATCATTGGGAGAACCCACTTGAGTTCAGACCAGAGAGGTTTATGAGTGAAGAGGGAAGTGGGAAGAGCCAGTTAGATGTGAGGGGACAACATTTTCACCTGATTCCATTTGGGAGTGGAAGAAGAGTGTGTCCTGGAGCTTCTCTGGCTTTGCAGGTTGTGCAGACGAACCTTGCTGCTATGATTCAGTGTTTTGAATGGAAGGTTGATGGAGGTAATGGGACTGTTGACATGGAAGAGAAACCCGGGATAACCCTTTCAAGGGCTCATCCCTTGATCTGTGTCCCGGTGCCTAGGCTTGATCCCTTTCCTCTAATCTGA 1551 0.4507 MVDYPGYILLFIIWLVSTIVVRAILLTRKLKKAHLPPSPVALPIIGHLHLLAPIPHQALHKLSTRYGPIMQLFLGSVPCVVASTPETAREFLKTQEAHFSNRPQNSAVDYLTYGSQDFSFAPYGPYWKFMKKTIMSELLGGHTLLQLLPVRRQETTRFLRLLLEKGKAGEAINVEDELLTLSNHVVSRMIMGQTSSENDSEAEEVRKLVQDTAHLTGKFNVSDFIWFFKNWDVQGFSKRLKEIRDRFDTMMEKVIKEHQEERRKRKELGGGDGHIKDLLDILLDIFEDENSEIKLTMENIKAFIMDIFVAGTDTSALTIEWALAELINHPHVMERARQEINAVIGDSRIVEESDLVNLPYLQAIVKETLRIHPTGPMIPRESTERCTILGYEIPARTQLFVNVWAIGRDPNHWENPLEFRPERFMSEEGSGKSQLDVRGQHFHLIPFGSGRRVCPGASLALQVVQTNLAAMIQCFEWKVDGGNGTVDMEEKPGITLSRAHPLICVPVPRLDPFPLI* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02864 516 PANTHER CYTOCHROME P450 98A9 13 511 - -
Rops8g02864 516 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02864 516 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02864 516 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02864 516 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02864 516 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02864 516 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02864 516 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02864 516 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02864 516 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02864 516 CDD CYP93 67 506 - -
Rops8g02864 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Rops8g02864 516 Gene3D Cytochrome P450 27 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02864 516 Pfam Cytochrome P450 36 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02864 516 SUPERFAMILY Cytochrome P450 30 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02864 516 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02864 516 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02864 516 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02864 516 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02864 516 FunFam Cytochrome P450 family protein 27 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02864 Rops-Chr8 64458477 64460429 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02864 1 509 Cytochrome P450 AT5G06900 50.000 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02864 K24188 - gmx:100779342 831.632