Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02862 ATGTTTCCGTGGCTTCAAAAGATACTTTGTGCATGCATGCATGATGATATTGATGACCACCCTGACCCTCTCATGTGTATTCATGACGATATTGATGACGACCCTGACACTCTCATGTGGAGTAGGGCCCTGGAGACGCATTCCTGCGGTGAATTCTCCTTCGCTGTGGCTCAGGCCAATATGAATCTTGAGGATCATAGCCAGGTTGAGACTGGTTCCGCTGCAATCTTCCTTGGAGTTTATGATGGCCATGACGGGATTATTCAGGAAAATGGTGCTATGTCCGAAGAAATTCTCAGGGATGCTGTTGCTGCTACTGAGCAAGGGTTCATGGATGTTACTCAAAGGGATTATCGAAGAAACCCACGAATAGTTAAAATGGGATCCTGTTGTCTGGTTGGTGTTATCTGGAATGGGACACTATATATCGCCAACCTTGGAGACTCCCGTGCTGTAATTTGTTATGTGAATCGATATAACAACATAATTGCTCAGCAGTTGACTAGAGAACACAATGTTAATTATGAGGAAGCTAAACAAGAACTCATGCAAATGCATCCCGATGATCGGAATATTGTGTATCGCAATAATGGAGCAATGCGCGTTAAAGGCATCATCCAGCTATCAAGAACTATAGGAGATGCATATTTGAAGCGGCCACAGTTCTCTTTAGATCCAACATTCCCACAGAACTATGTGCCTCCACCTTTTAACAGACCTGTGTTATCAGCAGAACCAGATGTATATAGAAGAGCTTTACGAGGCTCAGATAGATTCCTTATATTTGCATCTGATGGACTTTGGGAACACTTGACAAATCAGGAAGCAGCTGAGATTGTTCATAAGAATCCACGAACTGGAATTGCAGAAACACTTGTTAAGGCTGCTCTAAAGGTGGCAACTATTAAAGAGATGCCTGCATATCGACGCCTTACGAAGATTCCATGGAGTTTTCATGATGATATCACTGTGATTGTTGTTTTCATAGATCAAGATTTGCTTAACAATACAACCACTGTACGAGACACTGTACCAGCATTGTCCTTCAAAGGGTTTGTGGACTCGGTTGAACCGTCAAATTTTAATAATGTCGAGCAATTCATGTCGGCATACAAGGATTAG 1122 0.426 MFPWLQKILCACMHDDIDDHPDPLMCIHDDIDDDPDTLMWSRALETHSCGEFSFAVAQANMNLEDHSQVETGSAAIFLGVYDGHDGIIQENGAMSEEILRDAVAATEQGFMDVTQRDYRRNPRIVKMGSCCLVGVIWNGTLYIANLGDSRAVICYVNRYNNIIAQQLTREHNVNYEEAKQELMQMHPDDRNIVYRNNGAMRVKGIIQLSRTIGDAYLKRPQFSLDPTFPQNYVPPPFNRPVLSAEPDVYRRALRGSDRFLIFASDGLWEHLTNQEAAEIVHKNPRTGIAETLVKAALKVATIKEMPAYRRLTKIPWSFHDDITVIVVFIDQDLLNNTTTVRDTVPALSFKGFVDSVEPSNFNNVEQFMSAYKD* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02862 373 SMART PP2C_4 45 327 IPR001932 -
Rops8g02862 373 ProSiteProfiles PPM-type phosphatase domain profile. 51 329 IPR001932 -
Rops8g02862 373 CDD PP2Cc 52 329 IPR001932 -
Rops8g02862 373 Gene3D - 37 340 IPR036457 -
Rops8g02862 373 Pfam Protein phosphatase 2C 96 303 IPR001932 -
Rops8g02862 373 Coils Coil 371 373 - -
Rops8g02862 373 PANTHER PROTEIN PHOSPHATASE 43 327 IPR015655 GO:0004722|GO:0006470
Rops8g02862 373 SUPERFAMILY PP2C-like 53 330 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02862 Rops-Chr8 64415083 64419532 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02862 1 362 PP2C-type Phosphatase Gene Family AT5G06750 49.745 1.35e-125 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02862 K01102 - gmx:100778238 414.846