Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02861 ATGGTTGCTATTGGTGCTAGTGTTTTCTTCTACATCTTCTTCTCCCTAGCTTTGCTAATTTTCACCTTACTTGTCAAGTCCCTCAAAGTACGAAGCACAAATTGCAGCACCAAAGTTAGATCCCCACCAAGCCCACCATCACTACCCATCATTGGCCACCTTCACCTTCTGGGTTCTGTCATACCAAAATCATTCCAAACTCTTGCTCGCCGCTATGGCCCTCTCATTCAGCTCCAACTAGGCGCCTCAACATGTGTAGTTGTCTCCAATGCCCAAGTTGCCAAAGAAGTGATGAAAACACATGACCTTAATTTCTGCTACCGACCCCAATTTGGATCCTCTGACTACTTCCTATATAAAGGGTCTTATTTCATCACTGCCCCTTATGGCCCTTATTGGCGCTTCATGAAGAAACTATGTGTGACTCAACTACTCTCAAGCTCTCAGCTAGGACGCTTCATGCACATTCGAGAGCAGGAGATAAAGAAGCTTTTGAAATCTCTCATGGTGTGTTACCGTGAAGGCAGGGCCACCGATTTGAGTTTTGACCTCACTTCTTTGACCAACAATATCCTGTGTCGGATGGCTATGAGCACCACCTGCTTCGACAAAGCTAATGATGCCGAGGAGATTCAACGTTTGGTGCGGGAGTTTTTGCACGTTGGAGCTAAATTGAGCATGGGTGAGGTATTGGGACCTTTGGGGAAGTTGGACTTGTTTGGGTATGGGAAAAAGCTTGTAACAATAGTTGGCAAATTCGACAAGATTTTGGAGCGCATCTTGGAGGAACATGAAGAGAGAAAATACACCGAGGCTAGTCAAGGAGACATGATGGATATCCTATTACAAATTTATAGAAATTCAAATGCTGAAGTGAGGTTAACAAGGAATGATATCAAGGCCTTCTTCCTAGATATTTTCCTTGCGGGAACAGACACCACATCAGTGGCATTACAATGGGCCATGGCAGAGATCATGAACAACCCAATAATGTTAAAGAAGCTACGGGCAGAGATTGATGCATTGATGGGGACTAGCAGGCTGGTCAGAGAATCAGACATTCCAAATCTACCTTACCTCCAAGCTGTTGTGAAGGAAGTGCTGAGACTCCATCCAACGGCACCGTTTGCTCTTAGACAATCTGCACAAGACTGCAGCATCAACGGCTATGATGTGAAGGGCCAAACCAGGACACTGATCAATGTCTACGCCATCATGAGGGACCCGGAAGCATGGGACAATCCTGATGAGTTTATACCAGAGAGGTTCTTAGAAGGCAGTGATGGAGCTGAACATGTGATTAAAATGAACGGTGATGATTTCAGGTATCTTCCATTTGGGTTTGGCAGGAGGGGATGTCCTGGAGCTACCCTTGCTTTAACATTGATGCAAGTGACACTTGCAGCATTGATCCAATGTTTTGAATGGAAAATCAAAGGGGGAGATAAGGTTAATATGGAAGAAGGGTCATCATTTTCTGCAGGATTGGCAAAGCCACTAGTTTGCTACCCTGTCACTTGTTTTAATCCTTTTTAA 1536 0.4479 MVAIGASVFFYIFFSLALLIFTLLVKSLKVRSTNCSTKVRSPPSPPSLPIIGHLHLLGSVIPKSFQTLARRYGPLIQLQLGASTCVVVSNAQVAKEVMKTHDLNFCYRPQFGSSDYFLYKGSYFITAPYGPYWRFMKKLCVTQLLSSSQLGRFMHIREQEIKKLLKSLMVCYREGRATDLSFDLTSLTNNILCRMAMSTTCFDKANDAEEIQRLVREFLHVGAKLSMGEVLGPLGKLDLFGYGKKLVTIVGKFDKILERILEEHEERKYTEASQGDMMDILLQIYRNSNAEVRLTRNDIKAFFLDIFLAGTDTTSVALQWAMAEIMNNPIMLKKLRAEIDALMGTSRLVRESDIPNLPYLQAVVKEVLRLHPTAPFALRQSAQDCSINGYDVKGQTRTLINVYAIMRDPEAWDNPDEFIPERFLEGSDGAEHVIKMNGDDFRYLPFGFGRRGCPGATLALTLMQVTLAALIQCFEWKIKGGDKVNMEEGSSFSAGLAKPLVCYPVTCFNPF* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02861 511 Gene3D Cytochrome P450 27 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02861 511 SUPERFAMILY Cytochrome P450 38 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02861 511 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02861 511 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02861 511 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02861 511 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02861 511 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 14 493 - -
Rops8g02861 511 FunFam Cytochrome P450 family protein 33 502 - -
Rops8g02861 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Rops8g02861 511 CDD CYP93 73 504 - -
Rops8g02861 511 Pfam Cytochrome P450 42 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02861 511 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02861 511 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02861 511 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02861 511 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02861 511 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02861 511 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02861 511 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02861 511 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02861 Rops-Chr8 64386484 64388947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02861 14 511 Cytochrome P450 AT2G42250 52.295 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02861 - - gmx:106794180 757.288