Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02854 ATGCCTCCAAGCTCCAACAATGATATTTCATCTGCACAGCCTACCAATGCTGCTTCTGAAGGAACATCAGTTCTTGATCAGAGGGAAGAGTCCCAAAGATATAAAGGAGTTCAAAAAATCAAGGATAGACCATTCTATGTAGGTCATGTATGTGATTATGATCATGCAACAAAGAGCAAGGGAAAAAGTAAATTTGACAAGGAAGAGGATGCAGCCAGAGCTCGTGACTTGGTGAATTTGAAACTTTGGGGATCTAATTTACGAACAAATTTTCCAGAAAGTAACTACAAGAGAACACTGGAGGCTATGACTGATATGACAAAAATGGAAGTTGTGGATACTGTTAGAAGGCTATATCCATGTATCGTGGAGTCTGCAGACTCAGAGAAGGAAGCGGCAAGGGCTTTTGACATTGAAAGCATAAGGTTGAATGGGGACAAGGCCATTACTAATTTTGATATCAAGTGTTACAATGTTGGGGAGATTTTGAATGGAGAAACTGATGAAAAAGTAATCTATCATCCGAAAGACACATTGGAAGCAATTCAGCCTTTGGAAGTGCTTCGGAAGATTATAGGAACTCCAAGAATGTTTCATGATCCAGGCATTAGGAATGTGGAGGGAGAGCCACAACTAATGCAAATGGTAGTATCAGGAAACCAAGAAGAACAAGCAAATGGGGCATTGGCCTCAAGATTACAAGAAGATGGTGTTGACACTACTCTTTCCTTGGCAATTAAGAGGCCATCTTTGGACAATGGGAGTGAGGGTGAGGGAAGCTCAGCCTTGAGATTCCAGCATGCAAGGTCTCGTGGTCTTAAAGAATTCATTAAGAGGAGAACAGTTGGTGAGCCCTCTAACCATGTTGATGTTACTGAAGAAGTTTCAAAGGCTGTAAAATGA 903 0.412 MPPSSNNDISSAQPTNAASEGTSVLDQREESQRYKGVQKIKDRPFYVGHVCDYDHATKSKGKSKFDKEEDAARARDLVNLKLWGSNLRTNFPESNYKRTLEAMTDMTKMEVVDTVRRLYPCIVESADSEKEAARAFDIESIRLNGDKAITNFDIKCYNVGEILNGETDEKVIYHPKDTLEAIQPLEVLRKIIGTPRMFHDPGIRNVEGEPQLMQMVVSGNQEEQANGALASRLQEDGVDTTLSLAIKRPSLDNGSEGEGSSALRFQHARSRGLKEFIKRRTVGEPSNHVDVTEEVSKAVK* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02854 300 MobiDBLite consensus disorder prediction 1 37 - -
Rops8g02854 300 SUPERFAMILY DNA-binding domain 33 94 IPR016177 GO:0003677
Rops8g02854 300 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 19 117 - -
Rops8g02854 300 Gene3D AP2/ERF domain 32 93 IPR036955 GO:0003700|GO:0006355
Rops8g02854 300 ProSiteProfiles AP2/ERF domain profile. 33 92 IPR001471 GO:0003700|GO:0006355
Rops8g02854 300 MobiDBLite consensus disorder prediction 1 25 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02854 34 167 AP2-EREBP Transcription Factor Family AT1G51190 31.818 2.19e-20 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02854 K09285 - gmx:102664631 207.994