Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02835 ATGCTGGAATCCCCCAAACTGCTCCAAGCCTTGGCCATGGTTAACCTCAACAGCTCCGATGATGTGCCTCGTTGTGGGAGAACTGTTGATGAAGCCGCCAATAGGGTCTTCACCATTGTTGTTGGGGAAGGACATAGATCTGTACTTATTGAATTTCTGAGCTTTGGACTATTCCTTAAAAGGTGTTTGGAGTGTCTCCATAGACTAGCACTGTTGCTATGTGTTTTTGTTGGTTTCTTGCTACATCCTGTTGTGACAACTGTGATACCGTTGGGTTCCAAACTTTCTGTCATTGACAATAACTGTTGGGTTTCCTCCAATGGTGATTTTGCATTTGGGTTCTTTAACATTTCAGATGAACCTAACCAGTTTAGTGTTGGCATTCGTTTCAATTCAAAGTCTATGCCATATAGCCAACAAATAGTGGTCTGGGTTGCTGGTGCTCAGGTCACTGTAAGCAATAAATCCTATTTCCAACTCACTCAAGAAGGGGAATTGGTCCTGTTTGATTCCTTACAAGGAGTCACTGCATGGACTAGTGGAACAGGCAACCAATCTGTTGTTTCAGCTACTATTCATGATAATGGCAATCTTGTTCTGATAGACACAGAGCAAAACATCATTTGGCAAAGTTTTGATACTCCATCTGATACACTTCTCCCAGGACAGAGTTTATCTGTTTATCAAACACTTAGGGCTTCAACCAATAATCCTATGTCTAGTTACTACAGTCTTTACATGAATGCTTCTGGTCAGTTGCAGCTTCGCTGGGAGAGTAACATTATTTACTGGACAAGTGAAAGCCCTTCTTCTGCTTCAAATCTCACTGCATTCCTTACAACTGGTGGAGCTCTACAACTTCGAGACCAAAGTTTGAAAGCTGTCTGGAGTGTGTTTGGAGAAGACCACAATGATTCTGTGAGTTACAGATTTCTTAGGATAGATTTAAATGGCAATCTCCGCTTATATTCATGGGTTGAAACTTCACAATCATGGAGATCAGTTTGGCAAGCTGTTGAGAATCAGTGCAAGGTCTTTGCAACTTGTGGTCAACGTGGTGTGTGTGTCTTTACTGCTTCAGGTTCTGCTGATTGCAGGTGCCCTTTTGAGGTAACTGAGGGTAACAAATGTTTGGTTCCATATGAACAGGAATGTGAATCTGGTTCCAATATGATAACATATAAGAATACTTATCTGTATGGAATTTACCCTCCCGATGATTCAGTTATCATAAGTAGTTTGCAGCAATGTGAGCAGTTGTGCCAGAATGACCCACAATGTACTGTTGCAACCTTTTCCAACAATGGTAGTCCACAATGCTCCGTAAAGAAAACTAATTATATTACTGGCTATGCAGATCCGTCTCTAAGCTCAATATCACTTGTTAAGAGGTGCTCAGGTCCATTTGCTGTAAATCCTGGTCTCACGAAGTCACCTCCACCAAAACTGCCTCCTAGGCTCTGTGTTCCTTGTCTAGTTGGAGCATCCTCAGGAACATTTTTCATTTTGGTTATCCTTCAGCTGGGAATTGTTTTCTGCATCTACAGAAGAAAAAACTCCATTATGAGAAAAGTCACTTTAGCTTTCACATGCCCAAATTCAAAGGGATTAATCGTGTTATCCTTCTCAGAAATCAAGGGCCTCACCGAGGATTTCAAGAATCAAATTGGGCCGAATATGTTCAAGGGTGTGCTACCGAACGATCGCCTGATTGCAGTTAAAGACCTGAATGCATCCATAGAAGAAAGGAAGTTCCGGAGTGCTGTTTTGAAGATAGGGAGCATCCACCACAAGAACCTTTTGAAGCTGGAGGGTTATTGTTGTGAATTTAATCATAGATTTTTGGTGTATGACTATGTCAAAAATGGTTCACTGGACAAGTATTTAGATGATTGTACTCTTAGCAAGAAGCTAACTTGGAGAAAGAGAGTTGAAATATGCTCAAGTGTGGCAAAGGCCATCTGTTATTTGCACTCTGGGTGTAGGGAGTTTGTAAGCCATGGAAATTTAAAATGTGAGAATGTCATGTTGGATGAAAATTCAGTGGCCAAAGTATCTGAATATGGGTTTGCAATAGTGGATGGTGAGGCCACATGTTGTGGCTTTTCAGCTGAAAAGGATGTAGGGGATTTTGGCAAGTTAGTATTAACCTTGTTAACTGGATGTAGAGATCATGAACAACTTGGTGAGCGGGCATATAATGAATGGATAGAAGGGAAGGCGACTAATGTGGTTGATAAAAGAATTGATGGTGGTGCCAATTCAGAGGAACTGGAGCGTGCATTAAGAATCACATTTTGGTGCCTTCAAATGGATGAACGAAGAAGGCCACCTATGGAGGAGGTAGTGAGAGTACTCGAAGGTACATTGAATGTTGATCCACCACCACCTCCATTTACATTCCAGAGGCCATCACAGGAAGATGATTCCCAAGAAAATGGTTCAGAGTCAGTGCTTCAGTAG 2463 0.4166 MLESPKLLQALAMVNLNSSDDVPRCGRTVDEAANRVFTIVVGEGHRSVLIEFLSFGLFLKRCLECLHRLALLLCVFVGFLLHPVVTTVIPLGSKLSVIDNNCWVSSNGDFAFGFFNISDEPNQFSVGIRFNSKSMPYSQQIVVWVAGAQVTVSNKSYFQLTQEGELVLFDSLQGVTAWTSGTGNQSVVSATIHDNGNLVLIDTEQNIIWQSFDTPSDTLLPGQSLSVYQTLRASTNNPMSSYYSLYMNASGQLQLRWESNIIYWTSESPSSASNLTAFLTTGGALQLRDQSLKAVWSVFGEDHNDSVSYRFLRIDLNGNLRLYSWVETSQSWRSVWQAVENQCKVFATCGQRGVCVFTASGSADCRCPFEVTEGNKCLVPYEQECESGSNMITYKNTYLYGIYPPDDSVIISSLQQCEQLCQNDPQCTVATFSNNGSPQCSVKKTNYITGYADPSLSSISLVKRCSGPFAVNPGLTKSPPPKLPPRLCVPCLVGASSGTFFILVILQLGIVFCIYRRKNSIMRKVTLAFTCPNSKGLIVLSFSEIKGLTEDFKNQIGPNMFKGVLPNDRLIAVKDLNASIEERKFRSAVLKIGSIHHKNLLKLEGYCCEFNHRFLVYDYVKNGSLDKYLDDCTLSKKLTWRKRVEICSSVAKAICYLHSGCREFVSHGNLKCENVMLDENSVAKVSEYGFAIVDGEATCCGFSAEKDVGDFGKLVLTLLTGCRDHEQLGERAYNEWIEGKATNVVDKRIDGGANSEELERALRITFWCLQMDERRRPPMEEVVRVLEGTLNVDPPPPPFTFQRPSQEDDSQENGSESVLQ* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02835 820 ProSiteProfiles EGF-like domain profile. 339 378 IPR000742 -
Rops8g02835 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 140 218 IPR036426 -
Rops8g02835 820 Gene3D Phosphorylase Kinase; domain 1 515 619 - -
Rops8g02835 820 Gene3D Transferase(Phosphotransferase) domain 1 620 793 - -
Rops8g02835 820 ProSiteProfiles Bulb-type lectin domain profile. 216 335 IPR001480 -
Rops8g02835 820 MobiDBLite consensus disorder prediction 803 820 - -
Rops8g02835 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 516 619 - -
Rops8g02835 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 215 334 - -
Rops8g02835 820 Gene3D Hepatocyte Growth Factor 382 466 - -
Rops8g02835 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 232 334 IPR036426 -
Rops8g02835 820 PIRSF SRK 696 820 IPR024171 GO:0004674
Rops8g02835 820 PIRSF SRK 60 699 IPR024171 GO:0004674
Rops8g02835 820 Gene3D - 85 214 IPR036426 -
Rops8g02835 820 PANTHER OS07G0415500 PROTEIN 74 800 - -
Rops8g02835 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 85 214 - -
Rops8g02835 820 Pfam PAN domain 391 454 IPR003609 -
Rops8g02835 820 ProSiteProfiles Protein kinase domain profile. 500 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g02835 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 620 698 - -
Rops8g02835 820 SUPERFAMILY Protein kinase-like (PK-like) 561 787 IPR011009 -
Rops8g02835 820 ProSiteProfiles PAN/Apple domain profile. 385 465 IPR003609 -
Rops8g02835 820 CDD B_lectin 104 215 IPR001480 -
Rops8g02835 820 SMART blect_4 94 215 IPR001480 -
Rops8g02835 820 ProSiteProfiles Bulb-type lectin domain profile. 88 213 IPR001480 -
Rops8g02835 820 MobiDBLite consensus disorder prediction 788 820 - -
Rops8g02835 820 Pfam D-mannose binding lectin 142 229 IPR001480 -
Rops8g02835 820 Gene3D - 215 334 IPR036426 -
Rops8g02835 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 699 794 - -
Rops8g02835 820 SMART ntp_6 386 464 IPR003609 -
Rops8g02835 820 Pfam S-locus glycoprotein domain 305 367 IPR000858 GO:0048544
Rops8g02835 820 Pfam Protein tyrosine and serine/threonine kinase 568 691 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02835 Rops-Chr8 63818025 63826064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02835 540 805 Receptor kinase-like Gene Family AT4G21230 31.803 1.09e-35 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Rops8g02835 PK_Tyr_Ser-Thr 4.6e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02835 - - gmx:100809478 1276.92