LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops8g02818	ATGGCCGAATCACTTGTCTTTGATATTGCTGATTCACTGCTTGGGAAGCTTGCTTCTTTTACTTATGAAGAAGCTTCTCGAGCCTATGGTGTGTATGATGATCTGCAAGGGATCAGAGACACTTTGTCAATTGTCAAAGGTGTGCTGTTGGATGCTGAGGAAAAGAAGAACCAAAACCATGGCTTGCGTGAATGGCTGAGGCAGATCAGAAACATATGCTCCGATGCTGAAGATGTATTGGATGGATTTGAGTGCCAAAAATTGCGAAAGCAAGTTGTTGAATCTTGTGGCAGCACCAGCATGAAGGTAGGCCACTTCTTTTCTTCCCATAATCCTCTTGTTTTCCGTTTTAGGATGGCTCATCAAATCAAAGAAGTCAGGGATAGATTGGATAAGGTAGCAGCTGATGGGACCAACTTTGGTCTTGTGAGGATTGATGTTGATCCCAGACTTGTTGATCAAAGGAGAGGAATGACTCATTCCCATGTTGATGCTTCAGACGTGATAGGAAGGGAGAATGATAGGGAAGAAATTGTTCAGCTTTTGATGCAACCTCACACTGATGGTGATAAAAGTCTGTGTGTTATTCCCATAGTGGGAATTGGAGGCTTAGGGAAGACCACACTTGCAAAGTTGGTGTTCAATGATAAGAGGATGGATGATCTTTTCCAGTTGAAGATGTGGGTTTGTGTCTCTGTCTCTGATGATTTTGAAATTAGACAAATAATTATTAAAATCATCAACTCTGCATCTGCTTCTGCTTCGGCTCCAACTATTGCTCATGCTCATCAAGAAAATATTAACCACTTAGATATTGAGCAGCTACAAAGTCGTCTTAGATATAAGCTTTCTGGTCAAAAATTTTTACTTGTCTTAGATGATACATGGAATGATGATCGTGCAAAATGGATTGAGTTGGAAGATTTATTAAAAGTTGGTGCAGTAGGAAGCAAGATCTTAGTGACAACACGAAGTATCTCAATTGCTTCAATGATGGGCACTGTTCCCTCGTATGTTTTAGAAGGCCTTTCTCCAGATAATTGTTTATCTCTGTTTGTCAAATGGGCATTCAAGGAAGGAGAAGAAAAAAAATATCCAAATCTAGTGGAGGTCGGAAAAGAAATTGTGAAAAAATGCCAAGGGGTTCCACTAGCAGTGAGAACATTAGGAAGTTCCTTGTTCTCAAAATTTGATTTAGATAAGTGGGAATTTGTAAGAGATAATGAGATATGGAATTTAAAACAAAAGAGAGATGAGATTTTACCTGCGCTTAAGTTAAGCTATGATCAAATGCCCTCCCAATTGAGGCACTGTTTTGCTTACTTTTCCCTTTATCCCAAAGATTTTCGGTTCAACAAATATAGAATTACTAATTTTTGGTTGGCACTTGGATTACTTCAATCTCCTGATGGAAGTGAAACGCCAGAGAATATTGCAAGAGAATATATAGATGAGTTACATTCAAGATCATTTCTTCAAGATTTTGAAGATTATGGCTACTTCTACTTTTTCAAAGTACACGATTTGGTGCATGATCTTGCACTGTATGTTGCGACAGAGGAGTTTCTAATGGTACACACTCATATTCAGAATATACCTGAGCAAGTAAGGCATTTATCAATTGTTGAACATGATTCACTTGGCCATGCTTTGTTCCCCAAGTCCACAAGGGTGAGAACTATACTATTTCCCATCGAAGGAATAGGTGCTCATAGTAAACCACTATTGGATACATGGGTATCAAGATACAAATACTTGTGGTATTTAGATTTAAGTGATTCTTCGTTTGAGACTCTACCAAATTCAATTGGTAATTTAGAGCATTTGCGAGTTCTCGATCTTTCTAATAATCGCAAAATCAAAAGACTTCCTCATTCTATATGCAAACTCCAAAATCTGGAAGTTTTGTCATTCTTTGGATGCATAGAACTTGAAAAATTGCCTAAAGGTTTAGGGAAGCTGATCAGCATTCGGAAACTGGGCATAACCACGAAACAATCTGTTCTGTCAGAGAATGAATTTGCAAGCTTGAGCAATCTTCATACTCTGAGTTTTTCTAATTGTGACAATTTGGAGTCTTTGTTCAGTGGGGCACAACTCTCTTCGCTTGAAGAATTGTTTGTTCGATCATGTGGGAGCCTAGAGTCCTTACCTCTTTATAATCTCCCTAAATTAGAGGCTCTTTTTGTTATAGACTGTGAGATGCTACCACTGTCATGGAACCAGGAAATCTCAATTCAAAGATTGAGGATGAAACTTATATTTCTTGAGAGATTTCCATGGCTAGAAGCATTGCCTCGATGGATTGAAGGTGTTGCAGACAGTTTACAAACCTTGATTATTGCAGATTTTCCTCTTCTGAAGATGCTTCCGGAGTGGCTGACTACAATGACTCATCTTCAAAAGCTCTATATTGTTAGTTGTCCACAACTGTTGAGTCTTCCAAGTGACATGCATCGCCTCACTGCCCTGGAACACTTGGCCATTTATGACTGTCCTGAATTGTGTCGAAAATGTCAGCCCAAATCTGGTGAGTACTGGCCCATCATTGCTCACATCAAAAGGGTTAACATTGGAGAATCAAGAGGAGAGGAGGAAGGGCAAGGTAGGCCAGAGACAAGCATGGAAAAGCTAGATGAAGAGGTTGCAACAACACAATGA	2661	0.3931	MAESLVFDIADSLLGKLASFTYEEASRAYGVYDDLQGIRDTLSIVKGVLLDAEEKKNQNHGLREWLRQIRNICSDAEDVLDGFECQKLRKQVVESCGSTSMKVGHFFSSHNPLVFRFRMAHQIKEVRDRLDKVAADGTNFGLVRIDVDPRLVDQRRGMTHSHVDASDVIGRENDREEIVQLLMQPHTDGDKSLCVIPIVGIGGLGKTTLAKLVFNDKRMDDLFQLKMWVCVSVSDDFEIRQIIIKIINSASASASAPTIAHAHQENINHLDIEQLQSRLRYKLSGQKFLLVLDDTWNDDRAKWIELEDLLKVGAVGSKILVTTRSISIASMMGTVPSYVLEGLSPDNCLSLFVKWAFKEGEEKKYPNLVEVGKEIVKKCQGVPLAVRTLGSSLFSKFDLDKWEFVRDNEIWNLKQKRDEILPALKLSYDQMPSQLRHCFAYFSLYPKDFRFNKYRITNFWLALGLLQSPDGSETPENIAREYIDELHSRSFLQDFEDYGYFYFFKVHDLVHDLALYVATEEFLMVHTHIQNIPEQVRHLSIVEHDSLGHALFPKSTRVRTILFPIEGIGAHSKPLLDTWVSRYKYLWYLDLSDSSFETLPNSIGNLEHLRVLDLSNNRKIKRLPHSICKLQNLEVLSFFGCIELEKLPKGLGKLISIRKLGITTKQSVLSENEFASLSNLHTLSFSNCDNLESLFSGAQLSSLEELFVRSCGSLESLPLYNLPKLEALFVIDCEMLPLSWNQEISIQRLRMKLIFLERFPWLEALPRWIEGVADSLQTLIIADFPLLKMLPEWLTTMTHLQKLYIVSCPQLLSLPSDMHRLTALEHLAIYDCPELCRKCQPKSGEYWPIIAHIKRVNIGESRGEEEGQGRPETSMEKLDEEVATTQ*	887

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops8g02818	886	Gene3D	Ribonuclease Inhibitor	517	849	IPR032675	-
	Rops8g02818	886	Gene3D	-	153	337	IPR027417	-
	Rops8g02818	886	Gene3D	-	10	124	-	-
	Rops8g02818	886	CDD	RX-CC_like	2	134	IPR038005	-
	Rops8g02818	886	PANTHER	DISEASE RESISTANCE PROTEIN RP	63	742	IPR044974	GO:0006952
	Rops8g02818	886	Gene3D	-	342	426	IPR042197	-
	Rops8g02818	886	MobiDBLite	consensus disorder prediction	860	879	-	-
	Rops8g02818	886	PRINTS	Disease resistance protein signature	195	210	-	-
	Rops8g02818	886	PRINTS	Disease resistance protein signature	282	296	-	-
	Rops8g02818	886	PRINTS	Disease resistance protein signature	604	620	-	-
	Rops8g02818	886	PRINTS	Disease resistance protein signature	379	393	-	-
	Rops8g02818	886	MobiDBLite	consensus disorder prediction	860	886	-	-
	Rops8g02818	886	Gene3D	-	427	516	IPR036388	-
	Rops8g02818	886	SUPERFAMILY	L domain-like	505	849	-	-
	Rops8g02818	886	Pfam	Rx N-terminal domain	12	98	IPR041118	-
	Rops8g02818	886	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	156	441	IPR027417	-
	Rops8g02818	886	ProSiteProfiles	Leucine-rich repeat profile.	608	630	IPR001611	GO:0005515
	Rops8g02818	886	Pfam	NB-ARC domain	172	429	IPR002182	GO:0043531
	Rops8g02818	886	FunFam	Probable disease resistance protein At1g63360	428	516	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops8g02818	Rops-Chr8	63507094	63510648	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops8g02818	589	663	WRKY Transcription Factor Family	AT4G12020	40.000	3.18e-08	55.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops8g02818	-		-	gmx:100795479	1234.94