Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02805 ATGGTGATGCTATGGGAAGATCTGACAGTAGAGTATCCTAGTTTTGGTGCACACAAGAAGAAGTTACTTAATGGGGTCACTGGTTTTGCTGAACCTGGTAGGATCATGGCCGTTATGGGTCCTTCTGGTTGCGGCAAAACCACGCTACTCGACTCTTTGGCTGGAAGACTTTCTGCAAATGTTGTGATGACCGGCAACATTCTAATCAATGGGAAGAAGAGAAGTTTGCATTGCAGAGAAGTGTCTTACATTGCTCAAGAGGAACTCTTTTTGGGAACTTTGACTGTAAAAGAAACCCTCACCTACTCCGCAAACATGAGGCTTCCATCTAAAATGACCAATGATGAGATAGATAAAGTGGTGGAAGAAACAATAATGGAAATGGGTCTGAAAGAATGTACAAATAGTAAGATTGGGAATTGGCATTCACGTGGAATAAGTAATGGCGAAAAGAAGAGACTTAGCATTGCATTAGAGATTTTGACACAACCTCATGTCTTACTTCTTGATGAACCCACTAGTGGACTTGATAGTGCCTCAGCTTTCTATGTGATCCAAGCCCTTAGCAGCATATCTCGTAATGGAAAGATTGTCATAGGTTCCATTCACCAGCCCAGTAGTGAAACTTTCAATCTGTTTGATGATTTGCTTTTACTCTCAAGCGGGGAAATGGTTTATTTTGGAGAAGCAAAGATGGCTCTAAAGGTAAACAGTTTGACCACTCAGACTAACAAGATCCCAATAAAGTTAGTTGAATGTTTTGAGTCTCTAAATAAAGTTTTGGAACAGTTTTTCTCTGATGCAGGGTTCCCCTGTCCTATTCGAAGAAATCCTTCTGATCATTTTCTTTTGTGCATTAATTTGGACTTTGACTTGATTACTGCAACACTAGCAAGAACACGATTAAGTCCTTCAAAACCATCAAATCCAGCAGTAGGAATGACAACAGCACAGATTCGAGAGACACTCATCAAGAGTTATAAAAGTTCAGAGCTAATGATCAATGCAAGAAGAAGAATTCAACAACTGAAACCCAAGGTAATAATTTGTTAG 1053 0.3979 MVMLWEDLTVEYPSFGAHKKKLLNGVTGFAEPGRIMAVMGPSGCGKTTLLDSLAGRLSANVVMTGNILINGKKRSLHCREVSYIAQEELFLGTLTVKETLTYSANMRLPSKMTNDEIDKVVEETIMEMGLKECTNSKIGNWHSRGISNGEKKRLSIALEILTQPHVLLLDEPTSGLDSASAFYVIQALSSISRNGKIVIGSIHQPSSETFNLFDDLLLLSSGEMVYFGEAKMALKVNSLTTQTNKIPIKLVECFESLNKVLEQFFSDAGFPCPIRRNPSDHFLLCINLDFDLITATLARTRLSPSKPSNPAVGMTTAQIRETLIKSYKSSELMINARRRIQQLKPKVIIC* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02805 350 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 3 246 IPR003439 GO:0005524
Rops8g02805 350 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 231 IPR027417 -
Rops8g02805 350 Gene3D - 3 244 IPR027417 -
Rops8g02805 350 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 2 344 - -
Rops8g02805 350 SMART AAA_5 32 231 IPR003593 GO:0016887
Rops8g02805 350 Pfam ABC transporter 24 174 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02805 Rops-Chr8 63169906 63172399 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02805 30 188 Calmodulin-binding Proteins AT2G36910 30.120 3.20e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02805 K05681 - lja:Lj1g3v4239020.2 466.463