Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02804 ATGGTGATGCTATGGGAAGATCTGACAGTAGAACATCCTAGTTTTGGTGCAGACAAGAAGAAGTTGCTTAATGGGGTCACTGGTTTTGCTGAACTTGGTAGGATCATGGCCATTATGGGTCCTTCTGGCTCTGGCAAAACCACCCTACTCGACTCTTTGGCTGGAAGACTTTCGGCAAATGTGGTGATGAACGGCAACATTCTAATCAGTGGGAAGAAGAGAAGCTTGTATTGCAGAGAAGTGTCTTACATTGCTCAAGAGGAACTATTTTTGGGAACTTTGACTGTAAAAGAAACCCTCACCTACTCAGCAAACATGAGGCTTCCTTCTAAAATGACCAAAGAAGAGATAAATAAAGTGGTTGAAGAAACAATAATGAAAATGGGTCTTGAAGAGTGTGCAAATAATAAGATTGGGAATTGGCATTTACGGGGAATAAGTAACGGTGAAAAGAAGAGACTTAGCATTGGCTTAGAGATTTTGACACAACCTCATGTCTTACTGCTTGATGAACCCACTAGTGGACTTGATAGTGTCTCAGCTTTTTATGTGATCCATGCTCTTAGCAACATATGTTCTAATGGAAAGATAATTATATGTTCCATTCACCAGCCCACTAGTGAAACTTTTGATTTGTTTGATGATTTGCTTTTGCTCTCAAGCGGGGAAATGGTTTATTTCGGAGAAGCAAAGATGGCTCTAAAGTTTTTTTCTGATGCAGGGTTCCCCTGTCCTATTAGAAGAAATCCTTCAGATCATTTTCTTTTGTGTATTAATTTGGACTTTGACTTGCTTACTGCAACACTAGCAAGAACGCAATTAAGTCTGTCAACACCATCAAATCCAGCAGTAGGAATCAGAACAGCACAAATTCGAGGGACTCTCATTGAGAGTTACAAAAGCTCAGAGCTAATGACCAATGCAAGAAGAAGGATTCAACAACTGAAACCCAATGTAAAAATTTGTACCTCAATGGTCCCCAATGTGTTGATGGGCATAGGAGCAGCAACTGGTGTAATAATTTTCATGATGATGTCCTCCCAAATATCCAGACCGCTACCTGACATTCCAAAGTTCTTTTGGCGCTATCCCATGTACTACCTCAGTTTTGCTAATTGGGCTGTGCAGGGACAGTACAAGAATGACATGTTGGGGCTTGAGTTTGACCCTCTGCTACCTGGGCACCCAAAAATTAGTGGAGAACAATTTGACAAGGCAACTAAAGCTACTGAATCTAAGAAATCAATCCGTATGCATGAAAGCTATTACACCATAGTGTTTGGAGACAAGGAATGA 1296 0.4074 MVMLWEDLTVEHPSFGADKKKLLNGVTGFAELGRIMAIMGPSGSGKTTLLDSLAGRLSANVVMNGNILISGKKRSLYCREVSYIAQEELFLGTLTVKETLTYSANMRLPSKMTKEEINKVVEETIMKMGLEECANNKIGNWHLRGISNGEKKRLSIGLEILTQPHVLLLDEPTSGLDSVSAFYVIHALSNICSNGKIIICSIHQPTSETFDLFDDLLLLSSGEMVYFGEAKMALKFFSDAGFPCPIRRNPSDHFLLCINLDFDLLTATLARTQLSLSTPSNPAVGIRTAQIRGTLIESYKSSELMTNARRRIQQLKPNVKICTSMVPNVLMGIGAATGVIIFMMMSSQISRPLPDIPKFFWRYPMYYLSFANWAVQGQYKNDMLGLEFDPLLPGHPKISGEQFDKATKATESKKSIRMHESYYTIVFGDKE* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02804 431 Gene3D - 5 240 IPR027417 -
Rops8g02804 431 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 3 246 IPR003439 GO:0005524
Rops8g02804 431 Pfam ABC-2 type transporter 203 255 IPR043926 GO:0140359
Rops8g02804 431 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 321 413 - -
Rops8g02804 431 Pfam ABC transporter 25 174 IPR003439 GO:0005524
Rops8g02804 431 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 236 IPR027417 -
Rops8g02804 431 SMART AAA_5 32 231 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02804 Rops-Chr8 63131031 63136068 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02804 21 212 Calmodulin-binding Proteins AT2G36910 29.592 8.19e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02804 K05681 - gmx:100787198 485.723