LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops8g02802	ATGGTTGCTACTGATTGGGTTGATTCTAAAGCCATGGGCAACTTGGCTATTGCTGGTCATGATGCGGTCGTCTCTCGAAATCGTTTGTCTACTTTGTTTCTATCTGAAGAGAAAGAAGAATCTACACGCGATGATGGGAAGAATTTTGATGTGGGATCTCAGAGATATGACAGGGAGCTTGAGGATGAGGTTGAAATCTCTGAAGCAAGGACAAACATGGAGTCTTCTAACACAGGCAGCATGTCAGTGCCAGGCAAAGAAGAAACAGCATATATTCTGACTCCTCCATCCAAGCTTCTCATCAGAAGTAAATCAACCTGTTTGGCACCTATAGTTCGTGGAGCTCTTCATTCAAGTTCGCTGGACATGTGGCACTCCTCCAAGAAATGGTTCACTGAGGACAAGGAACTCACCCTGTTTGAAAGCGCGACAGGGGAGAGCTTCTGGGACTTTCTCAACAAAGATTCTGACACACTGAGCATGTTTCAAGATGCCATGGCAGCTGATTCCCATATGTTCAAGCTTGCCCTCAAAGAATGCAAGCATGTTTTTGAGGGTTTAGGTTCCTTAGTTGATGTGGGAGGTGGAACTGGAGGTGTCACAAAACTCATCCATGAAGCATTCCCTCACCTCAAATGCACTGTATTTGACCAACCACAGGTTGTGGCTAACTTGTCTGGAAATGAAAATTTGAACTTTGTTGGCGGAGATATGTTCAAATCCATCCCTCCTGCAGATGCAATTTTACTCAAGTGGGTTCTGCATGACTGGAATGATGAACTCTCCTTGAAGATATTGAAGAACTGCAAGGAAGCTATTTCAGGCAGAGGGAAAGAAGGGAAGGTGATTATCATAGACATATCAATTGATGAAACAAGTGATGATCGCGAATTGACAGAGTTGCAATTGGACTATGACTTGGTGATGCTCACCATGTTCACTTGGTAA	948	0.4399	MVATDWVDSKAMGNLAIAGHDAVVSRNRLSTLFLSEEKEESTRDDGKNFDVGSQRYDRELEDEVEISEARTNMESSNTGSMSVPGKEETAYILTPPSKLLIRSKSTCLAPIVRGALHSSSLDMWHSSKKWFTEDKELTLFESATGESFWDFLNKDSDTLSMFQDAMAADSHMFKLALKECKHVFEGLGSLVDVGGGTGGVTKLIHEAFPHLKCTVFDQPQVVANLSGNENLNFVGGDMFKSIPPADAILLKWVLHDWNDELSLKILKNCKEAISGRGKEGKVIIIDISIDETSDDRELTELQLDYDLVMLTMFTW*	316

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops8g02802	315	Pfam	O-methyltransferase domain	124	312	IPR001077	GO:0008171
	Rops8g02802	315	FunFam	O-methyltransferase ZRP4	103	314	-	-
	Rops8g02802	315	PANTHER	O-METHYLTRANSFERASE	87	311	IPR016461	GO:0008168
	Rops8g02802	315	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	107	312	IPR029063	-
	Rops8g02802	315	ProSiteProfiles	SAM-dependent O-methyltransferase class II-type profile.	22	315	IPR016461	GO:0008168
	Rops8g02802	315	Gene3D	Vaccinia Virus protein VP39	102	314	IPR029063	-

Showing 1 to 6 of 6 entries

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops8g02802	Rops-Chr8	63121273	63124230	Dispersed/Transposed

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops8g02802	140	311	Monolignol Biosynthesis Gene Families	AT5G54160	38.372	2.44e-33	124

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops8g02802	K22588		-	gmx:100807589	390.193

Showing 1 to 1 of 1 entries