Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02802 ATGGTTGCTACTGATTGGGTTGATTCTAAAGCCATGGGCAACTTGGCTATTGCTGGTCATGATGCGGTCGTCTCTCGAAATCGTTTGTCTACTTTGTTTCTATCTGAAGAGAAAGAAGAATCTACACGCGATGATGGGAAGAATTTTGATGTGGGATCTCAGAGATATGACAGGGAGCTTGAGGATGAGGTTGAAATCTCTGAAGCAAGGACAAACATGGAGTCTTCTAACACAGGCAGCATGTCAGTGCCAGGCAAAGAAGAAACAGCATATATTCTGACTCCTCCATCCAAGCTTCTCATCAGAAGTAAATCAACCTGTTTGGCACCTATAGTTCGTGGAGCTCTTCATTCAAGTTCGCTGGACATGTGGCACTCCTCCAAGAAATGGTTCACTGAGGACAAGGAACTCACCCTGTTTGAAAGCGCGACAGGGGAGAGCTTCTGGGACTTTCTCAACAAAGATTCTGACACACTGAGCATGTTTCAAGATGCCATGGCAGCTGATTCCCATATGTTCAAGCTTGCCCTCAAAGAATGCAAGCATGTTTTTGAGGGTTTAGGTTCCTTAGTTGATGTGGGAGGTGGAACTGGAGGTGTCACAAAACTCATCCATGAAGCATTCCCTCACCTCAAATGCACTGTATTTGACCAACCACAGGTTGTGGCTAACTTGTCTGGAAATGAAAATTTGAACTTTGTTGGCGGAGATATGTTCAAATCCATCCCTCCTGCAGATGCAATTTTACTCAAGTGGGTTCTGCATGACTGGAATGATGAACTCTCCTTGAAGATATTGAAGAACTGCAAGGAAGCTATTTCAGGCAGAGGGAAAGAAGGGAAGGTGATTATCATAGACATATCAATTGATGAAACAAGTGATGATCGCGAATTGACAGAGTTGCAATTGGACTATGACTTGGTGATGCTCACCATGTTCACTTGGTAA 948 0.4399 MVATDWVDSKAMGNLAIAGHDAVVSRNRLSTLFLSEEKEESTRDDGKNFDVGSQRYDRELEDEVEISEARTNMESSNTGSMSVPGKEETAYILTPPSKLLIRSKSTCLAPIVRGALHSSSLDMWHSSKKWFTEDKELTLFESATGESFWDFLNKDSDTLSMFQDAMAADSHMFKLALKECKHVFEGLGSLVDVGGGTGGVTKLIHEAFPHLKCTVFDQPQVVANLSGNENLNFVGGDMFKSIPPADAILLKWVLHDWNDELSLKILKNCKEAISGRGKEGKVIIIDISIDETSDDRELTELQLDYDLVMLTMFTW* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02802 315 Pfam O-methyltransferase domain 124 312 IPR001077 GO:0008171
Rops8g02802 315 FunFam O-methyltransferase ZRP4 103 314 - -
Rops8g02802 315 PANTHER O-METHYLTRANSFERASE 87 311 IPR016461 GO:0008168
Rops8g02802 315 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 107 312 IPR029063 -
Rops8g02802 315 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 315 IPR016461 GO:0008168
Rops8g02802 315 Gene3D Vaccinia Virus protein VP39 102 314 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02802 Rops-Chr8 63121273 63124230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02802 140 311 Monolignol Biosynthesis Gene Families AT5G54160 38.372 2.44e-33 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02802 K22588 - gmx:100807589 390.193