Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02797 ATGGAGTATTGTTCAAGAAAAGGGGTTCATGATTTCAACATGGCTTCAAGAAAAGCTGAAGAAGCAGCTTGGAGACGCTATGAGGCAACTCAGTGGTTGGAAAGCCAAGTGGGTCCTCTTGGCATATCCAAACAACCCACAGAGAGAGAACTTATTTCTTGCTTGAGAAATGGTCTGATTCTTTGCAATGCCATTAACAAGATTCATCCAGGAGCAGTGCCAAAGGTTGTGGATAATCAAGTAGCTTCACAATCGCTTATTTGGGATTCTCAACCTCTTCCTGCCTATCAGTATTTTGAGAATGTCCGCAACTTTCTGGTTGCAGCAGAACAATTAAAGCTTCCAGCTTTCGAAGCTTCTGATCTGGAAAGGGATAGCGTAGAGATGGGATCAGCAGCAAAAGTTGTTGATTGCATTCTATCACTTAAATCGTTTCAAGAATTGAAGCAGATGAACAATCAGAATGGATCCAACAGACACATAAAATCTCCTTTACTTATGCACTCAGCCAGTAGAATGCATTCAAGAGCCCCAACTGCATTCCAATCCTCAGATGCATGTAGGCGCTTGGATTTGTCTGCCACATTGGAAAAAACACCTCTTGTTGAGACTAATTTTCAGAAAGGAGAAGCAGAAATGGTGGAATCACTTGTCAAGCTATTGGTTGACCGTATGTTGGATGCCAAAGAAAATATTGGTGGAAACATAATTGCTTCTCTTCATAATGAAAACCTGGATCCAATAAAGTTATTTAATCAGATAATGACAAGTTGTTGCGGGGAACTGCCACTTACGAAGTTCCCTGAGTTGCCATTGCTGCTAAAGAATTTTATAAAAGAAAGAAATAGCTTGCCAACTCATTCAGATGCTTTATCTGCACCTGAAAGTTTCAAGTGTTACAGAGGTTGCCCAGGAAAGTGCACCTGCAATAAGAAGCATCTCTTAGACATGCAGGAAAAAGAACTTCTGGATCTCAAGGCTTTGAAGTTGAAAATTAAGAATGAGTTTGAAGAGATGCAGTTACAGTTTCAGAGATTTTTGTATGATATTGGAAGTCAAATACAGGATATGTCAACCAAAGCTCTTGGATATCACAAAGTAGTAGAAGAAAATAGGAAACTATACAACATGGTCCAAGATTTGAAAGGTAATATTCGAGTTTACTGCAGAATCAGGCCCTCATTCCGAGTTGAAACCAAGAATGTTATTGATTTCATTGGGGAAGACGGTTCGCTATTCATTTTAGATCCATCAAAAACACTAAAGGATGGAAGGAAACTTTTTCAGTTTAATCGGGTTTTTGGTCCAACAGCTGGCCAAGATGAGGTTTATAGAGACACTCAACCATTAATAAGATCCGTGATGGATGGGTATAATGTTTGTATTTTTGCTTATGGTCAAACTGGATCTGGGAAGACTTATACCATGAGTGGTCCTTCAGGTGGATCATCTAAAGATATGGGGATCAATTATCTGGCTCTTAACAATCTGTTTCAAATGTCTAATGAAAGGAAGGACATCATAAAGTATGACATTTATGTTCAAATGGTTGAGATTTACAATGAACAAGTAAGAGACCTACTTGCAGAGGACAAAATAGACAACAAATATCCTTTTCATATTCATTATTCCATTTTTGTCTCCTTAACTAACCTCAAATTAGAGATCCGGAGCTGCAATGATGATGGAATGAGCCTTCCTGATGCTAGATTGCGTCCAGTGAAGTCTACAACTGACGTTATTACTCTCATGAAACTTGGTGAGATTAATCGTGCTGTCAGTTCCACTGCAATCAACAATAGGAGTAGTCGTTCCCACAGTGTACTTACTGTGCATGTTCATGGCAAAGATACATCTGGGAGTACCATTCGTAGTTGCCTGCACTTAGTAGACCTTGCTGGAAGTGAAAGAGTAGACAAGTCTGAAGTTACAGGAGAAAGATTAAAGGAAGCACAATTTATTAACAAGTCTCTTTCCTGTTTGGGAGATGTGATCACAGCCCTGGCTCAGAAAAACTCTCACATTCCTTACAGGAACAGCAAACTCACACTTCTTTTGCAGGACTCTTTAGGTGGACATGCTAAAACGTTGATGTTTGCTCATGTGAGTCCAGAAGCGGATTCTTTTGGTGAAACAGTGAGTACTCTAAAATTTGCTCAGCGGGTTTCCACTGTGGAACTTGGGGCAGCCCGTAAGAACAAAGAAAGCAGTGAGGTTATGCAACTTAAAGAACAGGTTGAGAACCTTAAGATTGCATTGGCAAATAAGGAAAATTCGAGAGCAATGTTCAGTAGAACAAAAGAACCTCATACTCCATTAGAGAGGCCAATGTTGGCGTCCGAGAAAACTCCATTGCGCCCTCGAAGACTCAGCATTGAGAATTGCAGCGCCATAAAGACTGTCAAACCTGTGAATCCTGAGGATAAAAGTGGAGCCAAATCACCTTCCTTGTTACGTCGTTCAAGAAGATTAAGCTTAGAAGGTTCAAGAACTATCAAGAAAGACAGTCTACAACCAAAAGTAGCAACTGATCTAAGCAAAACTTTACAGTATGAGTCAGTGTCTCAGCAGAAATATCGTCCAATGCAAGATCCAGAAGCAGTTTCAAAGCTAAATGGCCATTTCAGCAATGGCAATTCTGGGTCAGAGTTGCGTGCCAAAGCTCCTCGAAGTCCTACAAGCATTAGCTATCAGAAGAGGTTGATAAAACTAGATGGTGGGGTCCAAATTCATCCTCTTAAACTACCTCAGACACCCGAACCACCAACCGGGCCAAGTGATCTTGCACTTTGTACTGATTCCCTGACAACTAAGGTGACAGGTAGCACAAATGGAAAAGGATCCCAGATAAGAAGATCCCTGAGAACAATTGGGAAACTGATTAATGGCCCTGATAAGAGGAGCCAACAAATTATGGTTGAAGTAAAGTCACCCATCAAGGGCACTAGCCATGCAAATCAAGTAAAGTCACCAGTATCAGCTGGTGAGAAGACAAAAAGGAGACAATCGTTAACAGGGATTCAACCGACAGGGCCAAACTCACGTAGATCTTCACTTGGAGGGAAGCCAGTAGCATATCTTCCTAGAACGCCTCCTCCTGTCCATTCAGACAACAAGACTTCAAAACGGTGGATATAG 3138 0.4095 MEYCSRKGVHDFNMASRKAEEAAWRRYEATQWLESQVGPLGISKQPTERELISCLRNGLILCNAINKIHPGAVPKVVDNQVASQSLIWDSQPLPAYQYFENVRNFLVAAEQLKLPAFEASDLERDSVEMGSAAKVVDCILSLKSFQELKQMNNQNGSNRHIKSPLLMHSASRMHSRAPTAFQSSDACRRLDLSATLEKTPLVETNFQKGEAEMVESLVKLLVDRMLDAKENIGGNIIASLHNENLDPIKLFNQIMTSCCGELPLTKFPELPLLLKNFIKERNSLPTHSDALSAPESFKCYRGCPGKCTCNKKHLLDMQEKELLDLKALKLKIKNEFEEMQLQFQRFLYDIGSQIQDMSTKALGYHKVVEENRKLYNMVQDLKGNIRVYCRIRPSFRVETKNVIDFIGEDGSLFILDPSKTLKDGRKLFQFNRVFGPTAGQDEVYRDTQPLIRSVMDGYNVCIFAYGQTGSGKTYTMSGPSGGSSKDMGINYLALNNLFQMSNERKDIIKYDIYVQMVEIYNEQVRDLLAEDKIDNKYPFHIHYSIFVSLTNLKLEIRSCNDDGMSLPDARLRPVKSTTDVITLMKLGEINRAVSSTAINNRSSRSHSVLTVHVHGKDTSGSTIRSCLHLVDLAGSERVDKSEVTGERLKEAQFINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPEADSFGETVSTLKFAQRVSTVELGAARKNKESSEVMQLKEQVENLKIALANKENSRAMFSRTKEPHTPLERPMLASEKTPLRPRRLSIENCSAIKTVKPVNPEDKSGAKSPSLLRRSRRLSLEGSRTIKKDSLQPKVATDLSKTLQYESVSQQKYRPMQDPEAVSKLNGHFSNGNSGSELRAKAPRSPTSISYQKRLIKLDGGVQIHPLKLPQTPEPPTGPSDLALCTDSLTTKVTGSTNGKGSQIRRSLRTIGKLINGPDKRSQQIMVEVKSPIKGTSHANQVKSPVSAGEKTKRRQSLTGIQPTGPNSRRSSLGGKPVAYLPRTPPPVHSDNKTSKRWI* 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02797 1045 Coils Coil 732 759 - -
Rops8g02797 1045 MobiDBLite consensus disorder prediction 980 1017 - -
Rops8g02797 1045 MobiDBLite consensus disorder prediction 976 1045 - -
Rops8g02797 1045 Gene3D Kinesin motor domain 326 727 IPR036961 -
Rops8g02797 1045 PANTHER KINESIN-LIKE PROTEIN KLP-3 30 907 IPR027640 GO:0003777|GO:0007018
Rops8g02797 1045 Gene3D - 10 166 IPR036872 -
Rops8g02797 1045 PRINTS Kinesin heavy chain signature 626 644 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g02797 1045 PRINTS Kinesin heavy chain signature 457 478 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g02797 1045 PRINTS Kinesin heavy chain signature 675 696 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g02797 1045 PRINTS Kinesin heavy chain signature 596 613 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g02797 1045 Coils Coil 315 335 - -
Rops8g02797 1045 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 384 759 IPR027417 -
Rops8g02797 1045 FunFam Kinesin-like protein KIN-14A 326 727 - -
Rops8g02797 1045 ProSiteProfiles Kinesin motor domain profile. 384 725 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g02797 1045 Pfam Calponin homology (CH) domain 25 144 IPR001715 GO:0005515
Rops8g02797 1045 SMART ch_5 25 145 IPR001715 GO:0005515
Rops8g02797 1045 Pfam Kinesin motor domain 410 724 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g02797 1045 MobiDBLite consensus disorder prediction 870 894 - -
Rops8g02797 1045 SMART kinesin_4 382 733 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g02797 1045 CDD CH_AtKIN14-like 25 144 - -
Rops8g02797 1045 ProSiteProfiles Calponin homology (CH) domain profile. 23 147 IPR001715 GO:0005515
Rops8g02797 1045 MobiDBLite consensus disorder prediction 868 894 - -
Rops8g02797 1045 FunFam Kinesin-like protein KIN-14L 11 174 - -
Rops8g02797 1045 MobiDBLite consensus disorder prediction 766 840 - -
Rops8g02797 1045 SUPERFAMILY Calponin-homology domain, CH-domain 22 154 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02797 Rops-Chr8 63034530 63042438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02797 314 750 Calmodulin-binding Proteins AT5G65930 38.739 1.08e-69 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02797 K10406 - gmx:100786642 1563.51