Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02793 ATGGCTGAATCATTTGCCTTCGATATTGCTCATTCACTGCTAGGGAAGCTTGCTTCTTTTGCTTATGAAGAAGCTTCTCGAGCCTATGGTGTGTATGACGATCTGCTAGAGTTCAAAAACACTTTGTCCATTGTCAAAGGTTTGCTGTTGGATGCCAAGGAGAATAAGGAGCAAAACCATGCGTTACGCGAATGGCTGAGACAGATCCGAAACATCTGCTTGGATGCTGAAGATGTATTGGATGGATTTGAGTGCCAAAGACTGCGAAAGCAAGTTGTTAAATCTAGTGGCAGCACCAGCATGAAGGTAGGCCACTTCTCTTCTTCCTATAATCCTCTTGTTTTCCGTTTTAGGATGGCTCATCAAATCAAAGATGTTAGGCAAAGATTGGATAAGGTAGCAGCTGATGGGACCAAGTTTGGTCTTGCTGATAGGACCAAGTTTGGTCTTGCTGAAAGGATTGATGCCAAACATAAAGACAGAGATACTCATTCCAGTGTTGATTCCGTTGTGATAGGAAGGGAGAATGATAGGGAAAGAATTGTTGAGCTTTTGATGCAACCTAACCCTGATGGTGATAAAAGTCCATGTGTTATTCCCATAGTGGGAATTGGAGGCATGGGGAAGACCACTCTTGCAAAGTTGGTGTTCAATGATAAGAGGATGGATGAACTTTTCCAGTTGAAGATGTGGGTGTGTGTCTCTGATGATTTTGTCATTAAGCAGATAATTATTAAAATCATTAACTCTGCTTCTGCTTTTGCTCTTGCTCGCCAAGAAAATATTGAACACTTAGATATTGAGCAGCTACAAAGTCATCTTAGAGACAAACTTTCTGGTCAAAAGTTTTTACTTGTCTTAGATGATATATGGAACGAAGATCGTGCAAAATGGATTGGGTTGGAAAATTTATTAAAAGTTGGCGCGGCAGGAAGCAAAATCTTAGTGACAACACGAAATAAAACAATTGCTTCAATGATGGGCACTGTTCCCTCGCCGTATGTTTTGGAAGGCCTTCCTCTAGAGGATTGTTTATCTCTGTTTGTCAAATGGTCATTTAAGAAAGAAGGAGAAGAAAAAAAATATCCAAATCTAGTGGAGGTCGGAAAGGAGATTGTGAAAAAATGCAGTGGGGTTCCGTTAGCGGTGACAACTTTAGGAAGTTCCCTGTTCTCAACATTTGATATAGAAAAGTGGGAATCTGTAAGAGATCATGACATATGGAATTTGAAACAACAGCCAGGTGATATATTACCTGCGCTCAAGTTAAGCTATGATCAAATGCCATCCTACTTGCGGAACTGTTTTGCTTACTTTTCCCTTTTTCCCAAAGATTTTGAGTTCGAAAGCTTGTCGACAGTTACTAATTTATGGTTATCAGTTGGATTACTTCAATCCCCCGATGGAAGTGAAAAGCCGATGAAAATTGCAAGAGAATATATACATGAGTTACATTCAAGACAATTTATTCTGGATTTTGAGGACTTTGGCCACTTCTACCGTTTCAAAGTACACGATTTGGTGCATGATCTTGCACAGTATGTTGCGAAAGAGGAGTTTCTAATCGTAGACTCCCGTACTCGAAACGTACCTGAGCAAGTAAGGCATTTTTCAATTGTTGAACATGATTCACTTGGCCATGCTTTGTTCCCCATGTCCACAAGAGTGAGGACTATTCTATTCCCCATTGGAGGAAGAGGTGTTGGTAGTAAAACTCTTTTGGATACATGGGTATCAAGATACAAATACTTACGGCATTTAGATTTACGTGAATCTTCGTTGGAGACTCTACCAAATTCAATTGGTAAATTAGAGCATCTGCGAGTTCTCGAGCTTTCTGGTAACCGCAAAATCAAAAGACTTCCTCATTCTGTATGCAAACTCCAAAATCTTCAAGTTTTGACACTTGATCGCACGGAGCTTGAAACATTGCCAAAAGGATTGGGGAAGCTGATTAGCCTTTGGAAACTGTACATAACCACAAAACAATCTGTTCTATCAGAGAATGAATTTGCAAGCTTGAGCAATCTTCATACTTTGGGTTTTGTTAAATGTGACAATTTGAAGTCTATGTTTGGTGGGGCACAAGTCACTTCTCTTGAAGCATTGGTGGTTCGATCATGTAGAAACCTAGAGACCATATATCTTGATAATCTCCCTAAATTAGAGACTCTTCTTGTTACAGACTGTGAGAAGCTACTACTATCAATGAACCATGAAATCGCAATTGAAAGATTGAGTATGAAATATCTACATCTTGAGAGATGTCCAAGGCTACAGGCATTGCCTGGATGGATTGAAGGAGCTGCAGACACTTTACAGACCTTGGTGATTCATCAATTTCCTGTTCTTAAGATGCTTCCAGAGTGGCTAACAACAATGAAACATCTTAAGACGCTCTATATTGGTGGGTGTCCACAACTGTTGAGTCTTCCAAGTGACATGCATCGCCTCACTGCCCTTGAAGAATTGTACATAGTTAATTGTCATGAATTGAGCCGAAAATGTCAGCCCAAAGCTGGTGAGTACTGGCCTATCATTGCTCACATCAAAAGGGTTAAGATTAAAGAAGCAAGAAGAGGAAGGCCAAGGTAA 2595 0.4019 MAESFAFDIAHSLLGKLASFAYEEASRAYGVYDDLLEFKNTLSIVKGLLLDAKENKEQNHALREWLRQIRNICLDAEDVLDGFECQRLRKQVVKSSGSTSMKVGHFSSSYNPLVFRFRMAHQIKDVRQRLDKVAADGTKFGLADRTKFGLAERIDAKHKDRDTHSSVDSVVIGRENDRERIVELLMQPNPDGDKSPCVIPIVGIGGMGKTTLAKLVFNDKRMDELFQLKMWVCVSDDFVIKQIIIKIINSASAFALARQENIEHLDIEQLQSHLRDKLSGQKFLLVLDDIWNEDRAKWIGLENLLKVGAAGSKILVTTRNKTIASMMGTVPSPYVLEGLPLEDCLSLFVKWSFKKEGEEKKYPNLVEVGKEIVKKCSGVPLAVTTLGSSLFSTFDIEKWESVRDHDIWNLKQQPGDILPALKLSYDQMPSYLRNCFAYFSLFPKDFEFESLSTVTNLWLSVGLLQSPDGSEKPMKIAREYIHELHSRQFILDFEDFGHFYRFKVHDLVHDLAQYVAKEEFLIVDSRTRNVPEQVRHFSIVEHDSLGHALFPMSTRVRTILFPIGGRGVGSKTLLDTWVSRYKYLRHLDLRESSLETLPNSIGKLEHLRVLELSGNRKIKRLPHSVCKLQNLQVLTLDRTELETLPKGLGKLISLWKLYITTKQSVLSENEFASLSNLHTLGFVKCDNLKSMFGGAQVTSLEALVVRSCRNLETIYLDNLPKLETLLVTDCEKLLLSMNHEIAIERLSMKYLHLERCPRLQALPGWIEGAADTLQTLVIHQFPVLKMLPEWLTTMKHLKTLYIGGCPQLLSLPSDMHRLTALEELYIVNCHELSRKCQPKAGEYWPIIAHIKRVKIKEARRGRPR* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02793 864 Gene3D - 424 514 IPR036388 -
Rops8g02793 864 Gene3D Ribonuclease Inhibitor 743 840 IPR032675 -
Rops8g02793 864 Gene3D Ribonuclease Inhibitor 568 742 IPR032675 -
Rops8g02793 864 CDD RX-CC_like 2 134 IPR038005 -
Rops8g02793 864 PANTHER DISEASE RESISTANCE PROTEIN RP 61 730 IPR044974 GO:0006952
Rops8g02793 864 Gene3D - 155 330 IPR027417 -
Rops8g02793 864 SUPERFAMILY L domain-like 503 831 - -
Rops8g02793 864 FunFam Probable disease resistance protein At1g61300 155 331 - -
Rops8g02793 864 PRINTS Disease resistance protein signature 198 213 - -
Rops8g02793 864 PRINTS Disease resistance protein signature 376 390 - -
Rops8g02793 864 PRINTS Disease resistance protein signature 602 618 - -
Rops8g02793 864 PRINTS Disease resistance protein signature 277 291 - -
Rops8g02793 864 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 438 IPR027417 -
Rops8g02793 864 Pfam NB-ARC domain 175 405 IPR002182 GO:0043531
Rops8g02793 864 Pfam Rx N-terminal domain 12 96 IPR041118 -
Rops8g02793 864 Gene3D - 339 423 IPR042197 -
Rops8g02793 864 Gene3D - 10 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02793 Rops-Chr8 62992542 62996162 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02793 193 832 WRKY Transcription Factor Family AT5G45050 22.720 2.04e-13 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02793 - - gmx:100794422 1141.33