Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02790 ATGGCCGAATCATTTGTCTTCGACATTGCTGAGTCACTGTTGGGGAAGCTTGCTTATTATGCTTATGAAGAAGCTTCTCGAACCTATGGTGTGTATGACGATATGCGACGGTTCAAAGACACTTTGTCAATTGTCAAAGGTTTGCTGTTGGATGCCGAGCAGAAGAAGGAGCAAAACCATGCGTTGTTTGAATGGCTGAGGCAGATCCGAAACATCTGCTCCGATGCTGAAGATGTATTGGATGGATTTGAGTGCCAAAGACTGCGAAAGCAAGTTGTTAGATCCTGTGGCAGCACCAGGATGAAGGTAGGCCACTTCTTTTCTTCCAATAATCCTCTTGTTTTCCGTTTTAGGATGGCTCATCAAATCAAAGATGTTAGGCAAAGATTGGATAAGGTAGCAGCTGATGGGACCAAGTTTGGTCTTGTGAGGATTGATGTCGATCATAGACTTGTTGGTCAAAGGAGAGAAATGACCCATTCCCATGTTGATGCTTCAGACGTGATAGGAAGGGAGAATGATAGGGAAGAAATTGTTGAGCTTTTGATGCAACCTCACTTTGATGGTGATAGAAGTCTGTGTGTTATTCCCATAGTGGGAATTGGAGGATTGGGGAAGACCACACTTGCACAGTTGGCGTTCAATGATAAGATGATGGATGATCTTTTCCAGTTGAAGATGTGGGTGTGTGTCTCTGATGACTTTGACATTAAGCAGATAATTATTAAAATCATCAACTCTGCTTCTGCTTCTGCTTCAGCTCCAGCTCCAGCTCCAGCTATTGCTCTTTCTCACCAAGAAAATATTACCCACTTAGATATCGAGCCGCTACAAAGTCGTCTTAGAAACAAACTTTCTGGTCAAAAGTTTTTGCTTGTCTTAGACGATATATGGAACGAAGATCGTGCAAAATGGTTTGAGTTGAAAAATTTATTAAAAGTTGGCGAAGTAGGAAGCAAGATCTTAGTGACAACACGAAGTATCTCAATCGCTTCTATGATGGGGGGCACTTTTCCCTCGTATGTTTTAGAAGGCCTTTCTCCAGAGGATTGTTTATCTCTGTTTGTCAAATGGGCATTTGAGGAAGGAGAAGATAAAAAATTTCCAGATCTGGTGGAGGTTGGAAAAGAGATCGTGAAAAAGTGTTGTGGGGTTCCACTGGCGGTGAGAACATTAGGAAGTTCCCTGTTCTCAAAATTTGATATAGAAAAGTGGGAATTTGTAAGAGATAATGAGATATGGAATTTAAAACAAAAGAGAGATGAAATATTACCCGCGCTCAAGTTAAGCTATGATCAAATGCCGTCTCATTTGAGACATTGTTTTGCCTACTTTTCCCTTTTTCCCAAAGATTTTGAGTTCTCCATCTGGAATATTGCTAATTTATCGTTGGCAGATGGATTACTTCAATCCCCCGATGGAAGTGAAAAGCCGGAGAATATTGCAAGAGAATACATAGATGAGTTACGTTCAAGATCATTTCTTCAGGATTTTAGTGAGTGTGGCCTCTTTTCCAGATTCAAAGTACACGATTTGGTGCATGATCTTGCACGGTATGTTGCGACAGAGGAGTTTCTAATGGTAGATTCCCGTACTCATAATGTACCTGAGCAAGTAAGGCATTTATCAATTGTTGAACATGATTCTCTTGACCATGCATTGTTCCCCAAGTCCACAAGAGTGAGAGCTATAATATTTCCCCTCAGAGGAATAGGTGTCGATAGTGAAACTCTTTTGGATACATGGGTATCAAGATACAAATACTTACGGCATTTAGATTTAAGTGAATCTTCGTTGGAGACTCTACCAAATTCAATTGGTAAATTAGAGCATCTGCGAGTTCTTAATCTTTCTAATAACCGCAAAATCAAAAGAGTTCCTCGTTCTATATGCAAACTCCAAAATCTGGAAGTTTTGTCATTCTTTGGATGCATAGAGCTTGAAACATTGCCAAAAGGATTGGGGAAGCTGATCAGCCTTAGGCAACTGTTCATAACCACGAAACAATCTGTTCTGTCAGAGAATGAATTTGCAAACTTGAGCAATCTGCATACTTTGGTTTTTCTTCGTTGTGACAATTTGAAGTCTTTGTTCTGTGGGGCACAACTCACTTCCCTTGAAACATTGTGGGTTCTATCATGTGAGAGCCTAGAGACCTTACCTCTTTATGTTCTCCCTAAATTAGAGACTCTTTATGTTAGAGACTGTGAGAAGCTACAAATGAACCATGAAATCCCAATTGAAAGATTGAGGATGAAACATCTATATCTTTGGGGATTTCCAAGGCTACAGGCATTGCCTGGATGGATTGAAGGAGCTGCAGACACTTTACAAACCTTGTTGATTGATGGATTTCCTGTTCTTAAGATGTTTCCAGAGTGGCTGACAACAATGACTCATCTTAAGACGCTCTATATTGGTGGGTGTCCACAACTGTTGAGTCTTCCAAGTGACATGCATCGCCTCACTGCCCTTGAAGAATTGATCATTTATGACTGTCCTGAATTGTGCCGAAAATGTCAGCCCAATTCTGGTGAGTACTGGCCTATCATTGCTCACATCAAAAGGGTTAAAATTGGAGAACCAAGAGGAGAGGAGGAAGGGCAAGGAAGTGTGCGAGAGGAAGATGAAGAGGCAGCAACAACACCATGA 2652 0.4103 MAESFVFDIAESLLGKLAYYAYEEASRTYGVYDDMRRFKDTLSIVKGLLLDAEQKKEQNHALFEWLRQIRNICSDAEDVLDGFECQRLRKQVVRSCGSTRMKVGHFFSSNNPLVFRFRMAHQIKDVRQRLDKVAADGTKFGLVRIDVDHRLVGQRREMTHSHVDASDVIGRENDREEIVELLMQPHFDGDRSLCVIPIVGIGGLGKTTLAQLAFNDKMMDDLFQLKMWVCVSDDFDIKQIIIKIINSASASASAPAPAPAIALSHQENITHLDIEPLQSRLRNKLSGQKFLLVLDDIWNEDRAKWFELKNLLKVGEVGSKILVTTRSISIASMMGGTFPSYVLEGLSPEDCLSLFVKWAFEEGEDKKFPDLVEVGKEIVKKCCGVPLAVRTLGSSLFSKFDIEKWEFVRDNEIWNLKQKRDEILPALKLSYDQMPSHLRHCFAYFSLFPKDFEFSIWNIANLSLADGLLQSPDGSEKPENIAREYIDELRSRSFLQDFSECGLFSRFKVHDLVHDLARYVATEEFLMVDSRTHNVPEQVRHLSIVEHDSLDHALFPKSTRVRAIIFPLRGIGVDSETLLDTWVSRYKYLRHLDLSESSLETLPNSIGKLEHLRVLNLSNNRKIKRVPRSICKLQNLEVLSFFGCIELETLPKGLGKLISLRQLFITTKQSVLSENEFANLSNLHTLVFLRCDNLKSLFCGAQLTSLETLWVLSCESLETLPLYVLPKLETLYVRDCEKLQMNHEIPIERLRMKHLYLWGFPRLQALPGWIEGAADTLQTLLIDGFPVLKMFPEWLTTMTHLKTLYIGGCPQLLSLPSDMHRLTALEELIIYDCPELCRKCQPNSGEYWPIIAHIKRVKIGEPRGEEEGQGSVREEDEEAATTP* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02790 883 PRINTS Disease resistance protein signature 607 623 - -
Rops8g02790 883 PRINTS Disease resistance protein signature 195 210 - -
Rops8g02790 883 PRINTS Disease resistance protein signature 284 298 - -
Rops8g02790 883 PRINTS Disease resistance protein signature 382 396 - -
Rops8g02790 883 Gene3D - 430 519 IPR036388 -
Rops8g02790 883 Pfam NB-ARC domain 173 432 IPR002182 GO:0043531
Rops8g02790 883 Gene3D - 153 337 IPR027417 -
Rops8g02790 883 Gene3D - 10 124 - -
Rops8g02790 883 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 444 IPR027417 -
Rops8g02790 883 Gene3D - 345 429 IPR042197 -
Rops8g02790 883 MobiDBLite consensus disorder prediction 861 883 - -
Rops8g02790 883 Pfam Rx N-terminal domain 11 98 IPR041118 -
Rops8g02790 883 Pfam Leucine rich repeat 589 640 IPR001611 GO:0005515
Rops8g02790 883 SUPERFAMILY L domain-like 508 848 - -
Rops8g02790 883 PANTHER DISEASE RESISTANCE PROTEIN RP 57 833 IPR044974 GO:0006952
Rops8g02790 883 Gene3D Ribonuclease Inhibitor 522 848 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02790 Rops-Chr8 62944504 62947933 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02790 196 836 WRKY Transcription Factor Family AT5G45050 22.059 2.73e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02790 - - gmx:100795479 1191.02