Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02788 ATGGTTGAATCATTTGCCTTTGATATTGCTGATTCATTGCTAGGGAAGCTTGCTTCTTATGTTTATGAAGAAGCTTCTCAAGCCTATGGTGTCTATGAAGATCTGCAGGGGTTCAAAGACACTTTGTCAATTGTCAAAGGTGTGCTGTTGGATGCTGAGGAGAAGCAGAAGCAAAACCATGGCCTGCGTGAATGGCTGAGGCAGATCCGAAACATCTGCTCCGATGCTGAAGATGTATTGGATGGATTTGAGTGCCAAAGACTGCGAAAGCAAGTTGTTACATCTTGTGGCAGCACCAGCATGAAGGTAGACCACTTTTTTTCTTCCGATAATCCTCTTGTTTTCCGTTTTAGGATGGCTCATCAAATCAAAGATGTTAGGCAAAGATTGGATAAGGTAGCAGCTGATGGGACCAAGTTTGGTCTTGTTGAGAGGATTGAAGTCGATCATAGACTTGTTGGGCAAAGGAGAGAAATGACCCATTCCCACGTTGATGCTTCAGAAGTGATAGGAAGGGAGAATGATAGGGAAGAAATTGTTGAGCTTTTGATGCAACCTCACCCTGATGGTGATAGAAGTCTGTGTGTTATTCCCATAGTGGGAATTGGAGGCTTGGGGAAGACCACACTTGCAAAGTTGGTGTTCAATGATAAGAGGATGGATGATCTATTCCAGTTGAAGATGTGGGTGTGTGTCTCTGATGACTTTGACATTAAACAGATAATTATTAAAATCATCAACTCTGCTTCTGCTTCAGCTCCAGCTATTGCTCTTTCTCACCAAGAAAATATTACCCACTTAGATATCGAGCCGCTACAAAGTCGTCTTAGAAACAAACTTTCTGGTCAAAAGTTTTTGCTTGTCTTAGACGATATATGGAACGAAGATCGTGCAAAATGGATTGAGTTGAAAAATTTATTAAAAGTTGGCGAAGTAGGAAGCAAGATCTTAGTGACAACACGAAGTATCTCAATCGCTTCTATGATGGGGGGCACTTTTCCCTCGTATGATTTAGAAGGCCTTTCTCCAGAGGATTGTTTATCTCTGTTTGTCAAATGGGCATTTAAGGAAGGAGAAGATAAAAAATTTCCAGATCTGGTGGAGGTTGGAAAAGAGATCGTGAAAAAGTGTTGCGGGGTCCCACTAGCGGTGAGAACATTAGGAAGTTCCCTGTTCTCAAAATTTGATATGGAAAAGTGGGAATTTGTAAGAGATCACGAGATATGGAATTTAAAACAAAAGAGAGATGAAATATTACCTGCGCTCAAGTTAAGCTATGATCAAATGCCGTCTCATTTGAGACATTGTTTTGCCTACTTTTCCCTTTTTCCCAAAGATTTTGAGTTCCTCAGCTGGAATATTACTAATTTATGGTTGGCAGATGGATTACTTCAATCCCCTGATGGAAGTGAAAAGCCGGAGAATATTGCAAAAGAATACATGCATGAGTTACGTTCAAGATCATTTCTTCTGGATTTTGAAGATTTTGGCTACTTCGACTATTTCAAAGTACACGATTTGGTGCATGATCTTGCACGGTATGTTGCAACGGAGGAGTTTCTAATGGTAGATTCCCATACTCAGAATGTACCTGAGCATGTAAGGCATTTATCAATTGTTGAACATGATTCAATTGGCTATGCTTTATTCCACAAGTCCACAAGAGTGAGAACTATAACATTTCCCTTCAGAGGAATAGGTGTCGATAGTGAAACTCTTTTGGATACATGGGTATCAAGATACAAATACTTACGATATTTAGATTTAAGTGATTCTTCGTTGGAGACTCTACCAAATTCAATCGGTAAATTAGAGCATCTGCGAGTTCTTAATCTTTCTAATAACCGCAAAATCAAAAGAGTTCCTCGTTCTATATGCAAACTCCAAAATCTGGAAGTTTTGTCATTCTTTGGATGCATAGAGCTTGAAAAATTGCCTAAAGGTTTAGGGAAGCTGATCAGCATTCAGAAACTGAGTATAACCACGAAACAATCTGTTCTGTCAGAGAATGAATTTGCAAGCTTGAGCAATCTGCATACTTTGTGTTTTGGTAACTGTGACAATTTGAAGTCTTTGTTCTGTGGGGCACAATTCACTTCCCTTGAAACATTGGTGGTTAAATCATGTGGGAGCCTAGAGACCTTACCTCTTTATAATCTCCCTAAATTAGAGAGTCTATTTGTTAGAGACTGTGAGAAGCTACAACTATCAATTAACCATGAAATCCCAATTGAAAGATTGAGGATGAAATATCTACATCTTTGGGAAGTTCCAAGGCTACAGGTATTGCCTGGATGGATTGAAGGAGCTGCAGACACTTTACATACCTTGGTGATTCGTCAATTTCATGTTCTTAAGATGCTTCCAGAGTGGCTAACAACAATGACACATCTTAAGACACTCTATATTATTAGTTGTCCACTACTGTTCAGCCTTCCAAGTCACATGCATCGCCTCACTGCCCTTGAACGATTGGCCATTTATGACTGTCCTGAATTGTGCAGAAAATGTCAGCCCAAATCTGGGGAGTACTGGCCTATCATTGCTCACATCAAAAGGGTTACCATTGGAGAACCAAGAGGAGAGAAGGAAGGTAAAAACATTATCTTGTCACCATCTTTGCTCGTTCCTTAG 2634 0.3998 MVESFAFDIADSLLGKLASYVYEEASQAYGVYEDLQGFKDTLSIVKGVLLDAEEKQKQNHGLREWLRQIRNICSDAEDVLDGFECQRLRKQVVTSCGSTSMKVDHFFSSDNPLVFRFRMAHQIKDVRQRLDKVAADGTKFGLVERIEVDHRLVGQRREMTHSHVDASEVIGRENDREEIVELLMQPHPDGDRSLCVIPIVGIGGLGKTTLAKLVFNDKRMDDLFQLKMWVCVSDDFDIKQIIIKIINSASASAPAIALSHQENITHLDIEPLQSRLRNKLSGQKFLLVLDDIWNEDRAKWIELKNLLKVGEVGSKILVTTRSISIASMMGGTFPSYDLEGLSPEDCLSLFVKWAFKEGEDKKFPDLVEVGKEIVKKCCGVPLAVRTLGSSLFSKFDMEKWEFVRDHEIWNLKQKRDEILPALKLSYDQMPSHLRHCFAYFSLFPKDFEFLSWNITNLWLADGLLQSPDGSEKPENIAKEYMHELRSRSFLLDFEDFGYFDYFKVHDLVHDLARYVATEEFLMVDSHTQNVPEHVRHLSIVEHDSIGYALFHKSTRVRTITFPFRGIGVDSETLLDTWVSRYKYLRYLDLSDSSLETLPNSIGKLEHLRVLNLSNNRKIKRVPRSICKLQNLEVLSFFGCIELEKLPKGLGKLISIQKLSITTKQSVLSENEFASLSNLHTLCFGNCDNLKSLFCGAQFTSLETLVVKSCGSLETLPLYNLPKLESLFVRDCEKLQLSINHEIPIERLRMKYLHLWEVPRLQVLPGWIEGAADTLHTLVIRQFHVLKMLPEWLTTMTHLKTLYIISCPLLFSLPSHMHRLTALERLAIYDCPELCRKCQPKSGEYWPIIAHIKRVTIGEPRGEKEGKNIILSPSLLVP* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02788 877 SUPERFAMILY L domain-like 503 845 - -
Rops8g02788 877 PRINTS Disease resistance protein signature 196 211 - -
Rops8g02788 877 PRINTS Disease resistance protein signature 377 391 - -
Rops8g02788 877 PRINTS Disease resistance protein signature 602 618 - -
Rops8g02788 877 PRINTS Disease resistance protein signature 279 293 - -
Rops8g02788 877 Gene3D - 340 424 IPR042197 -
Rops8g02788 877 Gene3D Ribonuclease Inhibitor 525 844 IPR032675 -
Rops8g02788 877 Pfam Leucine rich repeat 583 635 IPR001611 GO:0005515
Rops8g02788 877 Pfam Rx N-terminal domain 12 98 IPR041118 -
Rops8g02788 877 Pfam NB-ARC domain 173 427 IPR002182 GO:0043531
Rops8g02788 877 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 439 IPR027417 -
Rops8g02788 877 PANTHER DISEASE RESISTANCE PROTEIN RP 63 830 IPR044974 GO:0006952
Rops8g02788 877 Gene3D - 425 514 IPR036388 -
Rops8g02788 877 Gene3D - 153 332 IPR027417 -
Rops8g02788 877 CDD RX-CC_like 6 134 IPR038005 -
Rops8g02788 877 FunFam Probable disease resistance protein At1g61300 153 332 - -
Rops8g02788 877 Gene3D - 10 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02788 Rops-Chr8 62930566 62933199 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02788 197 833 WRKY Transcription Factor Family AT5G45050 21.719 4.50e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02788 - - gmx:100794422 1219.91