Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02787 ATGCCTGAATCATTTGTCTTCGATGTTGCTCATTCACTGCTAGGGAAGCTTGCTTCTTCAGCTTATGAAGAAGCTTCTCGAGCCTATGGTGTGTATGATGATCTGCAAGGGATCAAAGGCACTTTGTCAATTGTCAAAGGTGTGCTGTTGGATGCTAAGGAGAAGCAGAAGCAAAACCATGGCCTGAGTGAATGGCTGAGGCAGATCAAAAACATCTGCTTGGATGCTGAGCATGTATTGGATGGATTTGAGTGCCAAAGACTGCGAAAGCAAATTGTTAAATCTTGTGGTAGCACCAGCATGAAGGTAGGCCACTTCTTTTCTTCCTATAATCCTCTTGTTTTCCGTTTTAGGATGGCTCATCAAATCAAAGATGTTAGGCAAAGATTGGATAAGGTAGCAGCTGATGGGACCAAGTTTGGTCTAGTGAGGATTGATGTTGATCCCAGACTTGTTGGGCAAAGGAGAGAAATGACTTATTCCCATGTTGATGCTTCCGATGTGATAGGAAGGGAGAATGATAAGAGAAAAATTGTTCGGCTTTTGAAGCAACCTCACACTGATGGTGATAAAAGTCTGTGTGTTATTCCCATAGTGGGAATTGGAGGCTTGGGGAAGACCACACTTGCAAAGTTGGTGTTCAATGATAAGAGGATGGATGAACTTTTCCAGTTGAAGATGTGGGTGTGTGTCTCTGTCTCTGATGATTTTGACATTAAGCAGATAATTATTAAAATCATCAACTCTGCTTCAGCTTCAGCTCCAACAATTGCTCTTGCTCCCCATGAAAATATTAACCACTTAGATATTGAGCAGCTACAAAGTCATCTTAGAAACAAACTTTCTGGTGAAAAGTTTTTACTTGTCTTGGATGATATATGGAACGAAGATCGTGCAAAATGGATTGAGTTGGAAAATCTATTAAAAGTTGGCGCGGCAGGAAGCAAAATCTTAGTGACAACACGAAGTATGTCAATTGGTTTAATGATGGGTACTGTTCCCTCGTATGATTTAGAAGGCCTTTCTCCAGAGGATTGTTTATCTCTGTTTGTCAAATGGGCATTTAAGGAAGGAGAAGATAAAAAATATCCAAATCTAGTGGAGGTCGGAAAAGAGATTGTGAAAAAATGCTGCGGGGTTCCACTAGCGGTGAGAACATTAGGAAGTTCCCTGTTCTCAAAATTTGATATAGAAAAGTGGGAATTTGTAAGAGATAATGAGATATGGAATTTAAAACAAAGGAGAGATGAAATATTACCTGCGCTCAAGTTAAGCTATGATCAAATGCCGTCCTACTTGAGGAACTGTTTTGCTTACTTTTCCCTTTTTCCCAAAGATTTTGAGTTCCACAGCTTGACAGTTACTGATTTATGGTTGGCAGTTGGATTACTTCAATCCCCTGATGGAAGTGAAAAGCCGGAGAATATTGCAAAAGAATATATGGATGAGTTACATTCAAGATCATTTCTTCAAGATTTTAAGGACGTTGGCTACTTGTACAGTTTCAAAGTACACGATTTGGTGCATGACCTTGCACATTATGTTGCGAAAGAGGAGTTTCTAACGGTAGACTCCCATACTCGAAAGGTACCTGAGCAAGTAAGGCATTTATCAATTGCTGAACATGATTCACTTGGCCATACTTTATTCCACAAGTCCACAAGAGTGAGAACTATACTATTTTCCTTCGGAGGAAAAGGCTTAGATAGTAAAACTCTTTTGGATACATGGGTATCAAGATACAAATACTTACGATATTTAGATTTAAGAGATTCTTCGTTCGAGACTCTGCCAAATTCAATTGGCAAATTAGAGCATCTGCGAGTTCTCATACTTTCTCGTAACTGCGAAATCAAAAGACTTCCTTCTTCTATATGCAAACTCCAAAATCTACAAGTTTTGACACTTGATGGATGCAGGAAGCTTGAAACATTGCCAAAAGGATTGGGGAAGCTGATCAGCCTTCGGCAACTGTTCATAACCACAAAACAGTATGTTCTCCAAGAGAATGAATTTGCAAGCTTGAGCAATCTTCGTACTTTGGGTTTTGTTGATTGTGACAATTTGAAGTCTTTGTTTGGTGGGGCACAAGTCGCTTCCCTTGAAACATTGTGGGTTGAATCATGTGGGAGCCTAGAGACCTTACCTCTTTATAATCTCCCTAAATTAGAGACTCTTTATGTTAGAGACTGTGAGAAGCTACAACTATCAATGAACCATGAAATCCTAATTGAAAGATTAAGGATGAAATATATATATATACGGGAACTTCCAAGGCTACAGGCATTGCCTGGATGGATTAAAAGAGCTGCAGACACTTTACAAACCTTGATGATTGGTGAATTTCCTTTACTTAAGATGCTTCCGGAGTGGCTGACAACAATGACTCATCTTCAGAAGCTCTATATTTATAGTTGTCCACAACTGTTGAGTCTTCCAAGTGACATGCATCGCCTCACTGCCCTGGAAGAATTGATCATAGAAGATTGTCCTGAATTGGGTCGAAAATGTCAGCCCAAATCTGGTGAGTATTGGCCCATCATTGCTCACATCAAAAGGGTTGAAAGTGGACAACCAAGCGGAGAGGAGGAAGGTAAAAATATTATCTTGTCACCATCTTTGCTCGTTCCTTTGAGTTTGGATCTTACTCCATGA 2655 0.3989 MPESFVFDVAHSLLGKLASSAYEEASRAYGVYDDLQGIKGTLSIVKGVLLDAKEKQKQNHGLSEWLRQIKNICLDAEHVLDGFECQRLRKQIVKSCGSTSMKVGHFFSSYNPLVFRFRMAHQIKDVRQRLDKVAADGTKFGLVRIDVDPRLVGQRREMTYSHVDASDVIGRENDKRKIVRLLKQPHTDGDKSLCVIPIVGIGGLGKTTLAKLVFNDKRMDELFQLKMWVCVSVSDDFDIKQIIIKIINSASASAPTIALAPHENINHLDIEQLQSHLRNKLSGEKFLLVLDDIWNEDRAKWIELENLLKVGAAGSKILVTTRSMSIGLMMGTVPSYDLEGLSPEDCLSLFVKWAFKEGEDKKYPNLVEVGKEIVKKCCGVPLAVRTLGSSLFSKFDIEKWEFVRDNEIWNLKQRRDEILPALKLSYDQMPSYLRNCFAYFSLFPKDFEFHSLTVTDLWLAVGLLQSPDGSEKPENIAKEYMDELHSRSFLQDFKDVGYLYSFKVHDLVHDLAHYVAKEEFLTVDSHTRKVPEQVRHLSIAEHDSLGHTLFHKSTRVRTILFSFGGKGLDSKTLLDTWVSRYKYLRYLDLRDSSFETLPNSIGKLEHLRVLILSRNCEIKRLPSSICKLQNLQVLTLDGCRKLETLPKGLGKLISLRQLFITTKQYVLQENEFASLSNLRTLGFVDCDNLKSLFGGAQVASLETLWVESCGSLETLPLYNLPKLETLYVRDCEKLQLSMNHEILIERLRMKYIYIRELPRLQALPGWIKRAADTLQTLMIGEFPLLKMLPEWLTTMTHLQKLYIYSCPQLLSLPSDMHRLTALEELIIEDCPELGRKCQPKSGEYWPIIAHIKRVESGQPSGEEEGKNIILSPSLLVPLSLDLTP* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02787 884 Gene3D Ribonuclease Inhibitor 748 842 IPR032675 -
Rops8g02787 884 PRINTS Disease resistance protein signature 195 210 - -
Rops8g02787 884 PRINTS Disease resistance protein signature 280 294 - -
Rops8g02787 884 PRINTS Disease resistance protein signature 377 391 - -
Rops8g02787 884 PRINTS Disease resistance protein signature 626 642 - -
Rops8g02787 884 Gene3D - 10 124 - -
Rops8g02787 884 Gene3D - 425 514 IPR036388 -
Rops8g02787 884 PANTHER DISEASE RESISTANCE PROTEIN RP 64 830 IPR044974 GO:0006952
Rops8g02787 884 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 439 IPR027417 -
Rops8g02787 884 Pfam Leucine rich repeat 583 640 IPR001611 GO:0005515
Rops8g02787 884 Gene3D - 340 424 IPR042197 -
Rops8g02787 884 Pfam NB-ARC domain 176 427 IPR002182 GO:0043531
Rops8g02787 884 SUPERFAMILY L domain-like 503 834 - -
Rops8g02787 884 Gene3D Ribonuclease Inhibitor 529 746 IPR032675 -
Rops8g02787 884 Pfam Rx N-terminal domain 11 98 IPR041118 -
Rops8g02787 884 Gene3D - 154 332 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02787 Rops-Chr8 62876402 62879056 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02787 196 760 WRKY Transcription Factor Family AT5G45050 21.231 9.68e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02787 - - gmx:100794422 1194.1