Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02781 ATGGAGAGTTTTCTCAAGGATTTCGAGCTCGAGCACAAGAATCCCTCCGTCGAAGCTCTCCGGCGATGGAGATCCGCCGTCAGTCTCGTCAAAAACCGCCGCCGCCGCTTCCGTATGGTTGCCGATCTTGACAAGCGCTCCGAAGCTGAACAGATTAAGCAAGGAATCAAGGAAAAAATTCGGATTGCTCTCTATGTTCAGAAGGCAGCATTGCAATTTATTGATGCTGGTAATCGAGTTGAATACGAGCTATCAGATGAGGCAAGAGAAGCTGGTTTTGGCATTAATCCAGATGAGATTGCTTCTATTGTTCGTGCCCATGATTATAAGAACTTGAGTAATATTGGTGGAGTAGAAGCCATTGCAAGGAAGCTGTCGGTGTCTGTGGATGGAGGTGTTAGTGAAGCGAGTATTAAACGTAGACAAGAGATCTATGGGATCAACCGTTACACAGAGAAACCTCCGAGAACGTTCCTGATGTTTGTGTGGGATGCACTACAGGACTTAACTCTAATCATTCTCATGGTTTGTGCTATAGTTTCTATAGGTATAGGGATTGCCACTGAAGGGTGGCCAAAGGGAACGTATGACGGTGTGGGAATCATAATCAGCATATTCTTGGTAGTCATTGTTACTGCTGTCAGTGACTACAAGCAATCCCTGCAGTTCAGGGATTTGGACAAAGAGAAGAAAAAGATCTTTGTTCAGGTCACCAGGGATGGGAAAAGACAGAAGATCTCAATTTATGATATAGTAGTTGGTGATATTGTTCATTTCTCAACTGGTGATCAAGTTCCAGCTGATGGGATTTACTTATCAGGGTACTGTTTGCTAATTGATGAATCGAGTTTGTCAGGTGAGAGCGAACCAGTAAATGTAAATGAAGAAAAACCTTTTCTTCTATCAGGGACCAAAGTGCAGGATGGTCAGGGGATGATGTTAGTGACAACTGTTGGCATGAGGACTGAATGGGGAAAATTGATGGAAACTCTAAATGAGGGAGGAGAGGATGAGACCCCATTGCAGGTGAAATTGAATGGAGTTGCTACTATTATTGGTAAAATTGGTTTAACTTTTGCTGTTTTGACATTTGTGGTGTTGACTATAAGATTTCTGGTCGAAAAAGCACTTCATGGTGAGTTTGCTAGGTGGTCTTCAAATGATGCAATGAAACTGCTGGACTACTTTGCTATTGCTGTGACCATAATAGTTGTTGCTGTTCCTGAAGGATTACCACTAGCTGTGACACTCAGTCTTGCTTTTGCAATGAAAAAATTAATGAATGAAAAGGCTCTTGTGAGAAAGCTTGCTGCTTGTGAGACTATGGGTTCAGCTAGTTGCATTTGCACAGATAAGACAGGGACATTGACCACTAACCACATGGTGGTTAATAAAATATGGGTATGCGAAAAAGTCACGCAGATGAAAGGTAATGAGAGTGCAGATGAACTGAAAACAAAGATATCTGAAGGAGTTCAGAGCATCCTTCTGCAGGCTATATTTCAAAATACATCTGCTGAAGTAGTTAAGGATAAAGATGGAAAGAACACAATATTGGGAACACCAACAGAATCAGCATTGTTGGAATTTGGCTTGCTTTTGGGTTCTTATTCTGGTGGCCATGCCCAGCATAAAGCATATAAGATACTCAAGGTTGAGCCGTTCAATTCAGTCCGGAAGAAGATGTCTGTGCTTGTAGGTCTTCCTGATGGAGGGGTCCAAGCTTTCTGCAAAGGTGCATCAGAAATAATTTTAAAAATGTGTGACAAAATTATTGATTGCAACGGGGAAGTTGTTGATCTTCCTGAAGACCGAGCAAATGTTGTCTCTGATGTTATAAATGGCTTTGCCTCTGAAGCTTTGAGAACACTTTGTTTGGCTGTCAAAAATATAGATGAATCCCATGGGGAAACCAACATTCCTGATAGTGGCTATACTCTAATAGCCATAGTAGGGATCAAGGATCCTGTTCGCCCTGGTGTTAAGGAAGCTGTTCAAACTTGTATGGCCGCTGGAATAACTGTCCGCATGGTCACTGGTGATAACATATATACGGCTAGAGCTATAGCTAAAGAATGTGGTATACTTACTGAGGGTGGTGTAGCCATAGAAGGACCAAGTTTTCGTGACTTGTCTGCGGAGCAAATGAAGGATGTCATACCAAGAATCCAGGTAATGGCACGATCCTTACCGCTCGACAAGCATAAGTTAGTGACCAATTTGAGGAGTATGTTTGGTGAGGTTGTTGCTGTTACTGGCGATGGAACCAATGATGCACCTGCACTGCATGAGGCAGACATAGGACTTGCCATGGGCATAGCAGGAACCGAGGTTGCCAAAGAAAAGGCTGATGTCATTATAATGGACGATAACTTCACGACTATTGTAAATGTGGTCAAGTGGGGACGGGCAGTATATATAAACATTCAAAAATTTGTGCAGTTTCAATTAACGGTGAATGTTGTTGCTCTGGTTATCAACTTCTTTTCTGCATGCATCACTGGATCTGCTCCACTCACAGCTGTTCAGTTGCTTTGGGTCAACTTGATCATGGACACTCTGGGTGCATTAGCCCTGGCTACTGAACCTCCTAACGATGGACTTTTGAAAAGACCCCCAGTAGCAAAAGGAGCAAGCTTTATCACCAAACCTATGTGGAGGAATATCATTGGCCAAAGTATATATCAATTAATTGTACTTGCGATTCTTAATTTTGACGGGAAGAGACTACTCAGAATTAGTGGTTCAGATGCAACTGAAGTGCTCAACACTTTGATATTCAACTCCTTTGTATTTTGCCAGGTGTTTAATGAGATAAATAGCAGAGATATTGAAAAGATAAACATATTCAGAGGCATGTTTGATAGCTGGATATTTTTGTTGATAATTTTCGCCACCGTGGTATTTCAAGTGGTGATAGTTGAGTTCCTGGGAACGTTTGCCAGCACCGTGCCTCTAACCTGGCAATTCTGGTTACTCAGTGTCTTAATTGGGGCAGTTAGCATGCCTATAGCTGCTATCCTCAAGTGCATCCCGGTTGAAAGGAATACTAGTAAGCAGCACCATGATGGTTATGAGGCACTTCCATCTGGTCCTGAGCTGGCATAA 3108 0.4247 MESFLKDFELEHKNPSVEALRRWRSAVSLVKNRRRRFRMVADLDKRSEAEQIKQGIKEKIRIALYVQKAALQFIDAGNRVEYELSDEAREAGFGINPDEIASIVRAHDYKNLSNIGGVEAIARKLSVSVDGGVSEASIKRRQEIYGINRYTEKPPRTFLMFVWDALQDLTLIILMVCAIVSIGIGIATEGWPKGTYDGVGIIISIFLVVIVTAVSDYKQSLQFRDLDKEKKKIFVQVTRDGKRQKISIYDIVVGDIVHFSTGDQVPADGIYLSGYCLLIDESSLSGESEPVNVNEEKPFLLSGTKVQDGQGMMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIGLTFAVLTFVVLTIRFLVEKALHGEFARWSSNDAMKLLDYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNEKALVRKLAACETMGSASCICTDKTGTLTTNHMVVNKIWVCEKVTQMKGNESADELKTKISEGVQSILLQAIFQNTSAEVVKDKDGKNTILGTPTESALLEFGLLLGSYSGGHAQHKAYKILKVEPFNSVRKKMSVLVGLPDGGVQAFCKGASEIILKMCDKIIDCNGEVVDLPEDRANVVSDVINGFASEALRTLCLAVKNIDESHGETNIPDSGYTLIAIVGIKDPVRPGVKEAVQTCMAAGITVRMVTGDNIYTARAIAKECGILTEGGVAIEGPSFRDLSAEQMKDVIPRIQVMARSLPLDKHKLVTNLRSMFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKEKADVIIMDDNFTTIVNVVKWGRAVYINIQKFVQFQLTVNVVALVINFFSACITGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLLKRPPVAKGASFITKPMWRNIIGQSIYQLIVLAILNFDGKRLLRISGSDATEVLNTLIFNSFVFCQVFNEINSRDIEKINIFRGMFDSWIFLLIIFATVVFQVVIVEFLGTFASTVPLTWQFWLLSVLIGAVSMPIAAILKCIPVERNTSKQHHDGYEALPSGPELA* 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02781 1035 Gene3D - 15 76 - -
Rops8g02781 1035 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 48 IPR024750 GO:0005516
Rops8g02781 1035 NCBIfam calcium-translocating P-type ATPase, PMCA-type 109 1014 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Rops8g02781 1035 Pfam Cation transporter/ATPase, N-terminus 116 181 IPR004014 -
Rops8g02781 1035 FunFam Calcium-transporting ATPase 769 1015 - -
Rops8g02781 1035 FunFam Calcium-transporting ATPase 459 656 - -
Rops8g02781 1035 PRINTS P-type cation-transporting ATPase superfamily signature 649 660 - -
Rops8g02781 1035 PRINTS P-type cation-transporting ATPase superfamily signature 280 294 - -
Rops8g02781 1035 PRINTS P-type cation-transporting ATPase superfamily signature 671 681 - -
Rops8g02781 1035 PRINTS P-type cation-transporting ATPase superfamily signature 776 788 - -
Rops8g02781 1035 PRINTS P-type cation-transporting ATPase superfamily signature 752 771 - -
Rops8g02781 1035 PRINTS P-type cation-transporting ATPase superfamily signature 449 463 - -
Rops8g02781 1035 FunFam Calcium-transporting ATPase 211 332 - -
Rops8g02781 1035 ProSitePatterns E1-E2 ATPases phosphorylation site. 451 457 IPR018303 -
Rops8g02781 1035 PRINTS H+-transporting ATPase (proton pump) signature 752 768 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops8g02781 1035 PRINTS H+-transporting ATPase (proton pump) signature 784 809 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops8g02781 1035 PRINTS H+-transporting ATPase (proton pump) signature 609 627 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops8g02781 1035 SMART Cation_ATPase_N_a_2 108 186 IPR004014 -
Rops8g02781 1035 SUPERFAMILY Calcium ATPase, transduction domain A 234 330 IPR008250 -
Rops8g02781 1035 Pfam haloacid dehalogenase-like hydrolase 447 766 - -
Rops8g02781 1035 Pfam Cation transporting ATPase, C-terminus 837 1010 IPR006068 -
Rops8g02781 1035 FunFam Calcium-transporting ATPase 649 797 - -
Rops8g02781 1035 Gene3D - 132 332 - -
Rops8g02781 1035 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 455 661 IPR023299 GO:0000166
Rops8g02781 1035 CDD P-type_ATPase_Ca_PMCA-like 140 885 - -
Rops8g02781 1035 NCBIfam HAD-IC family P-type ATPase 721 839 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops8g02781 1035 NCBIfam HAD-IC family P-type ATPase 201 473 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops8g02781 1035 NCBIfam HAD-IC family P-type ATPase 545 697 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops8g02781 1035 Gene3D - 164 1011 - -
Rops8g02781 1035 Gene3D - 446 797 IPR023214 -
Rops8g02781 1035 PANTHER CATION TRANSPORTING ATPASE 85 1013 - -
Rops8g02781 1035 SFLD Haloacid Dehalogenase 431 804 - -
Rops8g02781 1035 Gene3D - 459 656 IPR023299 GO:0000166
Rops8g02781 1035 SUPERFAMILY Calcium ATPase, transmembrane domain M 116 1013 IPR023298 -
Rops8g02781 1035 FunFam Calcium-transporting ATPase 15 75 - -
Rops8g02781 1035 SUPERFAMILY HAD-like 448 857 IPR036412 -
Rops8g02781 1035 Pfam E1-E2 ATPase 234 428 - -
Rops8g02781 1035 SFLD p-type atpase 431 804 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02781 Rops-Chr8 62758987 62770512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02781 56 1032 Primary Pumps ATPases AT3G57330 73.388 0.0 1483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02781 K01537 - gmx:100783489 1791.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02781 8 62758987 62770512 Rops8g02781 8 62758987 62770512 ECH