Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02761 ATGGCGCCAAGACGAAAACCTTCTTCGTCTCCAATCTCTATCGGTAACTGCGAGATCATGGTCGAGGCTAACAGTTTCACCTGCAACACTGATTCAAACGGTGTCGTAATATCTCTTCCCCGAAGCGGAAAAATCAAAGTATCAGTGGTGCAAGATGTGTCTGCAAACCATGGAAACGTTTCCGAGGATTTAAGGTCCGAAGATAGAGAACACGAGTTCGTGTTAGTTAATCCTAAAGATGTTGATGGTGTTAGCAAATCCTACCTTCAGGAAGTGTTACAATTGTACATGACAGAGCTACCTGGAATGAATTATGCTGCAAATACCGGAAAGCAATCAAAGTTTCTAGAGAGATGCGTGAATAATGGGAAATATCGAACAGTACTTCTGAAATCCAGTTCTGATGGAAATTCGGGAAAGGTTATAGCTGCAATTACATATCAAATCATCCCTGCAGATACAGAATATGCGGAGATCCCACTTGCAGCTGTCAATGCAAGCTATCAACGGAAGGGTTTTGGTCATCTGTTGTTTCTAGAGCTATGGAAGAGACTTCAAAATGTTGGTGTTCGTTCTGTTTTCTGTTGGGGAGACAAAGAATCTGAAGGATTTTGGCTTAAACAGGGTTTTTTATCAATAGCACAGGTGGATGCCAAAGGTAGGGCTCGCAGGTTACCTGTAAAAGCTGATATTCGCAAATCATTATGCTATCCAGGCGGTTCAACTCTCATGGTTTGCCACCTAAGGAAGGAATTCTCAGCTGATGATGCTAACTCTGTGAAGTGTCTCCCCTCACAGCTTCACCAGAATTCCTATACACCTGCCATTGTTGAAAATGAGAGGCTTGAATTTTCAGGAGGGTTACACATTGATTTGAAATTTTCAAACCGGTCTTCCCATAAAACAGAAACAGATCAAAGTCTACCTGAAGATTTGGTGAAAGATGGATCTTCAAGAGAATATGACAAGCTCAGTGGGTTTGACAGTCACAATGCAATGAACTGCAGTGGTGATATTATTCCCTTTGCCAGAGCAAATGATGATAGACGGGCCACTGGTGCAGATTGTTCACAGGATGGGATTGACGCTAATGTGACGTATTGTTACCAATCTACAAAAGGTGCAAAGAGGGCCTGGGAAGCCTCTTTATCCTCGTTGAAGTCAAAAAGAGTGAAGGGAAGCCAGTTGGTTGACTGTCAATCAGATTGTAGCTGGGGTTTTATGGAAGCTGATAGGGTCAATCCTTGTTCTGTGGAAGTCTCTCATGTTGATTCTTTGATTAAGAAAAAATCTGAAAAATGTATTGGAGATTATTTGCACTCAGAAGTTCCCATCAACATAGAACTACCATCAATTAAACAATGCTTTAGAATCATGTTAATGAACATCGCTGATGATGCTAAGAAGACACAACTTACAAAGGTCATTGAAGACCTCGGGGGAACTATTGCCTATGATGGAAGCGAGGCCACACATGTTGTCACAGGACAAGTGAGAAGAACTCTGAATTTCTGTACCGCCCTCTGTTCAGGTGCTTGGGTGATTTCATCAAGTTGGTTAAAAGAAAGTTTTCGTGAAGGCAGATTTGTTGATGAATTGCCTCACATATTGGATGATAAGGATTATCTGTTGAAGTACAAATTTGATTTAAAAAGTGCAATTTTCCGAGCAAAAGCTAGCCCCCGTGCTTTGTTTAAGGGATATAATATATGTATTGCAGCTCATGCTCAGACTGCTGCCAAAACACTGTCAGCTATTGTCCGGTCTGCTGGTGGCAATGTTATTAATGGACTCGAAAAAGTAACTGAAGCATCAACAACAATCTTTGTGACATGCGAAGAAGACATAGAAGAAGCGATGATGGCTGCGAAGAAAGGCATACGGACTTTCAGTAATGAATGGTTTATGAACTGTGTCATGAGACAAGAGCTTGACCTGGACGCCCCTCAATTTGCAGAGTCCTTATAA 1968 0.4167 MAPRRKPSSSPISIGNCEIMVEANSFTCNTDSNGVVISLPRSGKIKVSVVQDVSANHGNVSEDLRSEDREHEFVLVNPKDVDGVSKSYLQEVLQLYMTELPGMNYAANTGKQSKFLERCVNNGKYRTVLLKSSSDGNSGKVIAAITYQIIPADTEYAEIPLAAVNASYQRKGFGHLLFLELWKRLQNVGVRSVFCWGDKESEGFWLKQGFLSIAQVDAKGRARRLPVKADIRKSLCYPGGSTLMVCHLRKEFSADDANSVKCLPSQLHQNSYTPAIVENERLEFSGGLHIDLKFSNRSSHKTETDQSLPEDLVKDGSSREYDKLSGFDSHNAMNCSGDIIPFARANDDRRATGADCSQDGIDANVTYCYQSTKGAKRAWEASLSSLKSKRVKGSQLVDCQSDCSWGFMEADRVNPCSVEVSHVDSLIKKKSEKCIGDYLHSEVPINIELPSIKQCFRIMLMNIADDAKKTQLTKVIEDLGGTIAYDGSEATHVVTGQVRRTLNFCTALCSGAWVISSSWLKESFREGRFVDELPHILDDKDYLLKYKFDLKSAIFRAKASPRALFKGYNICIAAHAQTAAKTLSAIVRSAGGNVINGLEKVTEASTTIFVTCEEDIEEAMMAAKKGIRTFSNEWFMNCVMRQELDLDAPQFAESL* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02761 655 CDD NAT_SF 137 196 - -
Rops8g02761 655 Pfam Acetyltransferase (GNAT) family 135 210 IPR000182 GO:0016747
Rops8g02761 655 SMART BRCT_7 450 527 IPR001357 -
Rops8g02761 655 SMART BRCT_7 562 642 IPR001357 -
Rops8g02761 655 Gene3D BRCT domain 450 561 IPR036420 -
Rops8g02761 655 SUPERFAMILY BRCT domain 457 539 IPR036420 -
Rops8g02761 655 CDD BRCT_PAXIP1_rpt6_like 564 645 - -
Rops8g02761 655 SUPERFAMILY BRCT domain 551 644 IPR036420 -
Rops8g02761 655 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 70 234 - -
Rops8g02761 655 Gene3D - 70 232 - -
Rops8g02761 655 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 88 214 IPR016181 -
Rops8g02761 655 Gene3D BRCT domain 562 654 IPR036420 -
Rops8g02761 655 Pfam BRCA1 C Terminus (BRCT) domain 464 524 IPR001357 -
Rops8g02761 655 ProSiteProfiles BRCT domain profile. 448 537 IPR001357 -
Rops8g02761 655 ProSiteProfiles BRCT domain profile. 560 644 IPR001357 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops8g02761 Acetyltransf_1 2.4e-05 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02761 - - gmx:100806087 1006.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02761 8 62315243 62323476 Rops8g02761 8 62315243 62323476 ECH