Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02745 ATGATCAATCAGAAAGTTGAAACTGAAGGAAGGTACAGCAATTATGCCAAATCTCAGAGTATGCTTGGAGCAGAGGACTCTGTTTCTGGGCAGCAAGAAAACAGAGGAAGATTGGAATCTAAGAAGAAACTGAAGAAAGTGAGATCAATAAGGCTTCTAAGATTGTCAAGCATGAGATCATCCACCAAAGGAGGGAAATCCCAATATGATAATCTCTCTGTTCTCTCATCTATTGACACAGAAAGTTCAGTGCAGCCAACCCCAATTGAAATGGCAGATGCATCTCCCAATTACATGAAGGCTACAAGTAGTTCTCATGCAAAGGATAGTTTTGAGAATACACAAAGACTTGTCACAAAGAAGACTTTAACAAGAATGTCTACTTTGAAACTGAAGAGGAGTCTGACCAGAAAGTTATCTGGAAGGACTGAACCAAAGAGGAAACTGAAATCATCAAGATCAATCAAGCTTGTAACTACAAAGGGCCCAAAATCAACAAGAAAGCTATCTGAATCCATTGGAAGTGATACTGGTAATAAATCTCAGAGAATCCTTACCAGAAGATTGAGCTTAAAGCCTGTGAGAATCTTAACAAAAATGCCCACTTTCAAATCAAAGAATTCTTTAATGGAGAAAGGTCCTCAGATGTCTCAGTCACAACACTCAAGCTTGCATAAAGCCACGTGTTCTTCCACTCTCAAGGATTCCCATTTCCCTGATCATATTGATCTCCCACAAGAGGAAAGTGGTTCTCAAGGAGTATCAGCTATGAAGGTTTGTCCCTATAGTTATTGTTCTCTTCATGGTCATCGCCATGGTAATTTGCCTCCATTGAAGCGCTTTGTGTCAATGAGGAGGCGTCAATTGAAGTCCCAAAAGATCATGAAAATGGATGGCCAACCTGCTACTAGATCAAAGCAGTTTGGTAATGCAAGGAAAGCCACTCAGAAAACCAAAAATGTCCACAATGTAGATGGCAGATCTCATTTTCAGAAAGTGAAGAATCTGGCAAGGGACTCACCTATTAGGCCTCATGACACTCCAGCATCCACTGTTGTTACTGAAGGTGGCACTTCTTGTGGAGAGGATGAAGAAAAATACAATTTCAGATATAATGCTGAAGAGTTACTGGGTGAAACATCATTTCCACATATGATAAATCTTGAGGAGTATCCTGGCAATTCTCTTGCAGTTAATGGGAACACTTTTCTGGCTGTCAAGGAAACAGATATTGAATGTTGCAGCATTGCCACTGAAAAGGATAAATCTGATTCTGAGGTAATTGAGACAGCAGGGAATGACAAGAATATGGCTGCAAGTGTTAATGTGGAATCAACATCAACTAGTGCTAATATGGAGCCAGATTATGAAGTACTGCAGAAGAGTTCTGTACAGGAAGAGCCTAAACCTGCTAATACTAAAGATGTGGCATATGGAATGCAGGAAAGAGATAATAAATATCTAAAAAAGTGGCACTTGATGTATAAGCATGCAGTATTAAGTAACACTGGGAAATGTGAAAATAAGCTTCCCTTGGATGAAAAGGACAAGGAAGGAAGAGAACAAAATGCTCTCACATTTGATGGAGTAAACAGCTCTTCTTGTCACAATTACGGTGAATCAGATCAGGATATGGATGATGAAAATAAGAATGTAATTGAGCTGGTGCAAAAAGCATTTGATGAAATCCTTCTCCCAGAAGCTGAAAACCTCTCTTCTGAGGACCATCTCAAATCTGGAGGAATTGGCTCAGATGAGGTACTCTTAGAAAAGAATGAAGGTAAGAGAGAGGAAAGGAATACCTCAACATCCACAGAATCTCCTAAAGAATCGCAGAGGATGGGGACCAAACCTGAGCAAAGAGCACCAAAAAGCTGGAGCAATCTCAAAAAGTTAATCCTCTTGAAAAGGTTTGTAAAGGCATTAGATAAGGTAAGAAACATCAACCCAAGAAGACCAAGACAATTGCCTCCAGATGCCAACTTTGAAGCAGAAAAAGTTTTTCTCAAGCACCAAACAGCTGAAGAGAGAAAAAATGCTGAGGAATGGATGCTTGATTATGCACTTCAAAAGGTTATTTCTAAACTTGCACCTGCTCAAAGAGAAAAAGTGACACTTCTAATAGAAGCTTTTGAAACAATTCTGCCATCTCAAGATGCTGAAAATGGCCCACAGTATCCTGCAACTGTGGAACCTCAACCAAATCCAATTCAATCCCTTGATGATTCGTCAGGTCATAGCAAGGAAGAAACAGACAATGGAATGGATTATGGTTATTCTGGTAAGATATTGCTTGGAAAAGCATCATGTTCTAATAATAGTACTATGGAATATGCAGATAATGCTAGTGACAGTCCAATGTCTGAACTGGACAATCCTATTGTGCTCAAAGAAAGATGTCTTGATTGTCCTGAGACCAAGACAGTCAAGAATATGCCTGCATCTGGAGCCATTGAAGAAAACTTGAATGGAAAGCAAAGTTTAGCCAGCAATTATGATGATGGTGAGAAGATCTCAATTGACAATGATAATGTTCATCTTAGAGAGAATGAAGATTCCAGATCATGTTCTTTAAGTGAGCCAGTTGATATTATTATAAGCAGCTGTCACGAGGAGGCTCCGACCAATGAATTAGTCAATGAAGTTCCAGAAGATTTGATATCAAATTTGAATGCAGAAAATCCAGATATCAAATCTGAGTCACCTGGAACAGATTTTGAAACCAAGGATGTGATTGGTGATAATAGGGAACAAGTTTCTATGTCCAAAAGTTCAATCCTAAATGGTCTTGTCAGATCACTCAGATCTAATTTGGTTGGTTCAGCAGCTTCTTCAAACCTATTAGATGAACCAACAAAAGACAGAAAAGAAAGGACTGAAAAAGCTAAGCTGGAAACTGGGGCACTTGAAGAGTTCCCAACAAACCAGCAATCTGAAGCTCCTATGAGCACTGTTGAAGAACCAGAGACTCAGCAAGGGAAACAAAGCTACACAGGACTGTGGTACTTGGTGTATAAGCACATGGTATCAGATATTGATGAAAACAATTCCAAGTCACTAGTTGATGAGGCAGATGAGAAAGAGTCAGAGCATGAAGGCAGTAGAACAAGAGGAACTTCAGTCTCTTATGAAAGCCCTGGGACTAATCAAGATATGCACTTCAAGGATCATGTTGTGGCTGACCCCGAAGTTGAACTCCAACAGATGGAAGCCATCAAGATGGTAGAAGATGCAATTGATTCAATCCTTCCTGATGTTCAGGATCACTTGCCAGAAAGTCACTCACTCACTGACAACACAACTTCAGACAACTCCAAACAATCCGATAGAAATGAAAGAATGTGCAGTGAAGGTTCGAACCAAGAAGAAGAAAGGACCCAAAAACAACAACAAGGAGAAGAATCAGCAGCAAAGGAAGGAAACAAACCAAACCAGCAATTGTCTGGAAGCTGGAGCAATCTTAAAAAAGTACTCCTGCTTAGGAGATTTATCAAGGCATTGGAAAAAGTAAGGAAATTCAACCCAAGAGGGCCCAGATTTCTACCTACAGAGCCTGATCCAGAAGCTGAAAAAGTTAACTTGAGGCATCAAGACATGGCAGAAAGAAAAGGCACAGAAGAATGGATGCTTGATTATGCACTTCGACAGGTTGTTTCCAAATTAAACCCTGCTAGGAAAAGAAAAGTGGAGCTGCTAGTGGAAGCTTTTGAAACAGTCATACCAACCATAAAAAATTGA 3738 0.3986 MINQKVETEGRYSNYAKSQSMLGAEDSVSGQQENRGRLESKKKLKKVRSIRLLRLSSMRSSTKGGKSQYDNLSVLSSIDTESSVQPTPIEMADASPNYMKATSSSHAKDSFENTQRLVTKKTLTRMSTLKLKRSLTRKLSGRTEPKRKLKSSRSIKLVTTKGPKSTRKLSESIGSDTGNKSQRILTRRLSLKPVRILTKMPTFKSKNSLMEKGPQMSQSQHSSLHKATCSSTLKDSHFPDHIDLPQEESGSQGVSAMKVCPYSYCSLHGHRHGNLPPLKRFVSMRRRQLKSQKIMKMDGQPATRSKQFGNARKATQKTKNVHNVDGRSHFQKVKNLARDSPIRPHDTPASTVVTEGGTSCGEDEEKYNFRYNAEELLGETSFPHMINLEEYPGNSLAVNGNTFLAVKETDIECCSIATEKDKSDSEVIETAGNDKNMAASVNVESTSTSANMEPDYEVLQKSSVQEEPKPANTKDVAYGMQERDNKYLKKWHLMYKHAVLSNTGKCENKLPLDEKDKEGREQNALTFDGVNSSSCHNYGESDQDMDDENKNVIELVQKAFDEILLPEAENLSSEDHLKSGGIGSDEVLLEKNEGKREERNTSTSTESPKESQRMGTKPEQRAPKSWSNLKKLILLKRFVKALDKVRNINPRRPRQLPPDANFEAEKVFLKHQTAEERKNAEEWMLDYALQKVISKLAPAQREKVTLLIEAFETILPSQDAENGPQYPATVEPQPNPIQSLDDSSGHSKEETDNGMDYGYSGKILLGKASCSNNSTMEYADNASDSPMSELDNPIVLKERCLDCPETKTVKNMPASGAIEENLNGKQSLASNYDDGEKISIDNDNVHLRENEDSRSCSLSEPVDIIISSCHEEAPTNELVNEVPEDLISNLNAENPDIKSESPGTDFETKDVIGDNREQVSMSKSSILNGLVRSLRSNLVGSAASSNLLDEPTKDRKERTEKAKLETGALEEFPTNQQSEAPMSTVEEPETQQGKQSYTGLWYLVYKHMVSDIDENNSKSLVDEADEKESEHEGSRTRGTSVSYESPGTNQDMHFKDHVVADPEVELQQMEAIKMVEDAIDSILPDVQDHLPESHSLTDNTTSDNSKQSDRNERMCSEGSNQEEERTQKQQQGEESAAKEGNKPNQQLSGSWSNLKKVLLLRRFIKALEKVRKFNPRGPRFLPTEPDPEAEKVNLRHQDMAERKGTEEWMLDYALRQVVSKLNPARKRKVELLVEAFETVIPTIKN* 1246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02745 1245 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 720 IPR044681 GO:0005516
Rops8g02745 1245 MobiDBLite consensus disorder prediction 303 317 - -
Rops8g02745 1245 MobiDBLite consensus disorder prediction 949 967 - -
Rops8g02745 1245 MobiDBLite consensus disorder prediction 588 604 - -
Rops8g02745 1245 MobiDBLite consensus disorder prediction 524 545 - -
Rops8g02745 1245 MobiDBLite consensus disorder prediction 1 34 - -
Rops8g02745 1245 Pfam Plant calmodulin-binding domain 612 716 IPR012417 GO:0005516
Rops8g02745 1245 Pfam Plant calmodulin-binding domain 1138 1241 IPR012417 GO:0005516
Rops8g02745 1245 MobiDBLite consensus disorder prediction 945 993 - -
Rops8g02745 1245 MobiDBLite consensus disorder prediction 1 44 - -
Rops8g02745 1245 MobiDBLite consensus disorder prediction 1105 1132 - -
Rops8g02745 1245 MobiDBLite consensus disorder prediction 1016 1037 - -
Rops8g02745 1245 MobiDBLite consensus disorder prediction 339 359 - -
Rops8g02745 1245 MobiDBLite consensus disorder prediction 1133 1149 - -
Rops8g02745 1245 MobiDBLite consensus disorder prediction 1016 1052 - -
Rops8g02745 1245 MobiDBLite consensus disorder prediction 291 319 - -
Rops8g02745 1245 SMART CaM_binding_2 1127 1241 IPR012417 GO:0005516
Rops8g02745 1245 SMART CaM_binding_2 603 716 IPR012417 GO:0005516
Rops8g02745 1245 MobiDBLite consensus disorder prediction 525 539 - -
Rops8g02745 1245 MobiDBLite consensus disorder prediction 571 623 - -
Rops8g02745 1245 MobiDBLite consensus disorder prediction 970 993 - -
Rops8g02745 1245 MobiDBLite consensus disorder prediction 138 181 - -
Rops8g02745 1245 MobiDBLite consensus disorder prediction 1089 1149 - -
Rops8g02745 1245 MobiDBLite consensus disorder prediction 718 755 - -
Rops8g02745 1245 MobiDBLite consensus disorder prediction 155 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02745 Rops-Chr8 62005913 62010651 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02745 553 723 Calmodulin-binding Proteins AT5G04020 37.634 3.01e-21 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02745 - - aprc:113861458 1615.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02745 8 62005913 62010651 Rops8g02745 8 62005913 62010651 ECH