Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02735 ATGGGGATGGCTGCAGAGTCACAGTTTCATGTGTTGGCTGTTGATGACAGCCTCATAGATAGGAAGTTGATTGAAAGGCTGCTCAGAACATCTTCCTATCAAGTTACTACAGTTGATTCTGGTAGCAAGGCTTTAGAGTTTCTGGGCTTGCGTGAGAATGATGAGAGCAACCCAAATATACCATCTGTTTCTCCTAACAATCATCAGGAAGTGGAGGTGAATCTTGTTATAACAGACTACTGTATGCCTGGCATGACAGGCTATGATTTGCTTAAGAAAATGAAGGAATCTTCATCTTTGAGAAACATACCAGTGGTGATCATGTCATCTGAGAATGTGCCTTCAAGAATTAATAGATGCTTGGAGGAAGGAGCAGAGGAATTTTTCTTGAAGCCTGTGAGGCCTGCAGATCTGAATAGACTTGAACCCCATCTGAAGAAGACCAAGTTGAAAAATCAAAAACAAGAAACAGCAGAAAAGCTTGAGAACCCTGAAGTTCAAGAAAAGCAGCAGCCAGAAGAAGTCCCAAATGACCAGCAACAAGCACCAAAATCCCAATATCCACAGCCACAGTCAGAGTCACATTTACAGCCTCAAGCACAGCCAAATATAGATCAACAGCAACAATCACTAATACAGGCCAACAATAACAAGAGGAAGACCATTGAACAGGGGCTTTCACCTGAGACTGACAGAACAAGACCAAGATACAGTGGCATAGCCACTGTGGTATGA 735 0.4272 MGMAAESQFHVLAVDDSLIDRKLIERLLRTSSYQVTTVDSGSKALEFLGLRENDESNPNIPSVSPNNHQEVEVNLVITDYCMPGMTGYDLLKKMKESSSLRNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRPADLNRLEPHLKKTKLKNQKQETAEKLENPEVQEKQQPEEVPNDQQQAPKSQYPQPQSESHLQPQAQPNIDQQQQSLIQANNNKRKTIEQGLSPETDRTRPRYSGIATVV* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02735 244 CDD REC_typeA_ARR 11 141 - -
Rops8g02735 244 SMART REC_2 9 142 IPR001789 GO:0000160
Rops8g02735 244 MobiDBLite consensus disorder prediction 140 172 - -
Rops8g02735 244 MobiDBLite consensus disorder prediction 173 223 - -
Rops8g02735 244 MobiDBLite consensus disorder prediction 140 244 - -
Rops8g02735 244 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
Rops8g02735 244 SUPERFAMILY CheY-like 8 160 IPR011006 -
Rops8g02735 244 Gene3D - 10 233 - -
Rops8g02735 244 Coils Coil 204 224 - -
Rops8g02735 244 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 207 IPR045279 GO:0009736
Rops8g02735 244 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02735 Rops-Chr8 61772497 61774628 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02735 1 244 Response Regulator Gene Family AT3G57040 64.113 1.04e-101 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops8g02735 Response_reg 1.6e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02735 K14492 - gmx:100814494 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02735 8 61772497 61774628 Rops8g02735 8 61772497 61774628 ECH