Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02715 ATGGCTAACAACAAGAACAAGGAGAGAGAGGCTGAGTTTTTCTCGGATCAGATCAATGAGGACGAAACTAACGAAGGTGAACAGGATGTTGAAGCTGTCAAGTACGAGAGTGAGAGTGAGAGTAATAATGAGGGTGGCAGTGACGATGATAGAGCACAACCTCATTCTTTCTCTTCTCAGCAATGGCCTCAAAGTTACAAAGACACCACTGATTCTTACACAATTGCTGCAGCTCCAAATCTTGAATCAATTATACGAGCACCGAGTGTTATTTATTCAAGCTTTGTCAGTCGTTCAAAGAGTTACCTAGAACAAGATGGAAGGACTTCTTTTCTATCTGGTCATGAAGCTAGTCAAATTCAAGAAGGGCTCTCGAGAAGACAATCAACATGGTGGGAGAAAGCTTCAATTCAAATGCAAATTCCTGAAGAATTACCCATTGGTTATGGATGTAGCTTCACTCAAACAATATTCAATGGGATTAATGTGATGGCTGGAGTTGGCCTTCTATCTACACCTTTTACAGTGAAGCAAGCTGGGTGGGCAAGTTTGGTGGTGATGCTTCTTTTTGCAGTTGTATGTTGTTATACAGCAGACCTTATGAGACACTGTTTTCAAAGCAGAGAAGGGATCATTAGCTACCCGGATATAGGACAAGCTGCATTTGGAAAATATGGCCGAGTTATTATATCATCATATTGTGTGGAATTTATCATCTTGGAAGGAGACAACCTTACTGGGCTGTTTCCTGGAACATCCTTGCATTGGGGCAGTTTGCATTTGGACTCCAAGCACTTGTTTGGAATTTTGACTGCACTTATTATTCTCCCAACTGTTTGGTTGAAGGATCTTCGTATAATCTCCTATCTCTCAGCTGGAGGGGTTATTACTACAACTTTGATTATTCTATGTGTGTTTGCTGTTGGGACAACAGATAATGTAGGATTCCATCACACTGGTCCATTGGTGCATTGGAGTGGCATTCCATTTGCTTTTGGTATCTACGGTTTTTGCTTTGCAGGGCATTCAGTTTTTCCAAATATTTACCAATCTATGGCTAACAAAGGAGACTTTACCAAGGCAATAATGACATGTTTTATTTTGGCCATGTTGATATATGGAAGTGTTGCTACCATGGGATTTCTCATGTTTGGTGAAGGGACTTTGTCTCAGATAACATTGAATCTACCACGAGATGCATTTGCTTCCAAAGTTGCCTTATGGACAACAGCAGTGATTTTGCCAGCTCTATGCTTTCTGAAAATTGTGGGGAAGAAAGCAACAAGTACACAGGTTGCCCTCAGCATCGTAATAGCTGCATGGGGAATCACAAGTGCTTTCTTTGGAACATATTCATCTCTATCAAAGATTGTGCAGCGTAGCTGA 1386 0.4105 MANNKNKEREAEFFSDQINEDETNEGEQDVEAVKYESESESNNEGGSDDDRAQPHSFSSQQWPQSYKDTTDSYTIAAAPNLESIIRAPSVIYSSFVSRSKSYLEQDGRTSFLSGHEASQIQEGLSRRQSTWWEKASIQMQIPEELPIGYGCSFTQTIFNGINVMAGVGLLSTPFTVKQAGWASLVVMLLFAVVCCYTADLMRHCFQSREGIISYPDIGQAAFGKYGRVIISSYCVEFIILEGDNLTGLFPGTSLHWGSLHLDSKHLFGILTALIILPTVWLKDLRIISYLSAGGVITTTLIILCVFAVGTTDNVGFHHTGPLVHWSGIPFAFGIYGFCFAGHSVFPNIYQSMANKGDFTKAIMTCFILAMLIYGSVATMGFLMFGEGTLSQITLNLPRDAFASKVALWTTAVILPALCFLKIVGKKATSTQVALSIVIAAWGITSAFFGTYSSLSKIVQRS* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02715 461 PANTHER OS05G0424000 PROTEIN-RELATED 153 426 - -
Rops8g02715 461 MobiDBLite consensus disorder prediction 1 65 - -
Rops8g02715 461 Coils Coil 4 24 - -
Rops8g02715 461 Pfam Transmembrane amino acid transporter protein 152 400 IPR013057 -
Rops8g02715 461 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02715 Rops-Chr8 61363976 61371017 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02715 20 412 Amino Acid or Auxin Permease AAAP Family AT2G41190 58.588 1.95e-165 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02715 K15015 - gmx:100790344 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02715 8 61363976 61371017 Rops8g02715 8 61363976 61371017 ECH