Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02678 ATGAGTCAGCCTTTAGATTCTTCTTCTTCTCCTCTTTCACCTCATTCTTCTTCTTCCTCTGTGTTGTTCTTCTGTGGTGGTGCTTCTCTATGTTTTAATCACTCAGTTTGCTTCTCACTCTCTTATTCTTATTCTCATACCACACACATTTTCACCATGACGAAGATTAGTCCTGAAATTGAAATCAAGATGCCAATGGAAGCAGTTCCGCCAGTTTCAGCTGACGTGAGCTTTATTTCCAATACTTTTCCAAAGTATAAACTGGGAGATGATAATCAAATTCTGGAAGAGCCTATTGAGGATAACCAGGGTCCTTTTTTGAAGGATGTTATTGAACAAGAAGCTACCAATTTGTCAGACCAGCATAAGCGTATCTCAGTTCGTGACCTTGCCAGTAAATTTGACAAGAACTTAGCTGCAGCTGCAAAGTTGTCTAATGAGGCAAAGCTAAGAGAGGTGGCATCTTTGGAGGGACATGTCCTTTTGAAAAAACTAAGAGATGCATTAGAATCTTTAAGAGGCCGTTTTGCAGGAAGAAACAAGGAGGATGTGGAGAAAGCTATCTCTATGGTGGAAGCTTTAGCAGTTAAGTTGACTCAAAATGAAGGAGAATTGATTCAAGAGAAGTTTGAAGTGAAGAAGCTTGTGAACTTTCTCAAACAGGCTTCTGAAGATGCTAAAAAGTTGGTTAATCAAGAGAAGTCTTTTGCTTGTGCTGAAATCGAGAGTGCTAGGGCAGTGGTGCTGAGAATTGGGGAGGCACTTGAGGAACAAGAAAAAGTCTCCCAAGCTTCTAAACCACAGGATGTGGATGGACTGGTAGAAGAGGTTCAAGAGGCTAGAAGAATCAAATTGTTGCATCAGCCAAGCAAGGTCATGGCCATGGAATATGAACTTCGTGCTCTAAGGGATCAAATTCGAGAAAAATCTATATTTTCAATTAAGCTTCAAAAAGAGCTAACAATGAGCAAGAGGGACGAGGAGAATAAATCTCATTCATATATGTTAGATGGTTCTGAAGCTTTGGGTTCATATCTGCGAGTCAAGCCTTGCTCGGATGAAGTGCCACAGGTTTCAAACTGTTCATTTCAGTGGTATCGCTTGTCATCTGAAGGAAGCTGGAGAGAAGTTATTTCAGGTGCCAACAAATCAATATATGCTCCTGATCCCTTTGATGTTGGGAGATTCTTACAAGTGGACATTGTCTCCAATGGAAAAAAACTTACACTAACAACTAATCCCATTCAAACTGTTTCAGGACTTGGAAGCCATGTGGAGACACTTCTACGAAAATCTAATACTGATTTTCATGTGGTTATCTCTCAGATGAATGGCAAAGATCACTCATCACATTCTACTCATTCTTTTAATGTGGGGAGAATGAGGATAAAGCTATGTAGAGGTTGGATTACAAAAGCTAGAGAGATTTACTCCCCATCAATGCAGCTATGTGGAGTTAGAAGTGATGTCAGCAACGCAGCGAAGTCAGTGTTTTGGCAAGCTAGAAAGGGGCTATCATTTGTATTAACCTTTGAATCAGAGAGAGATAGAAATGTAGCCATCATGGTTGCCAGGAAACATGCCCTTGATTGCAATGTGGTGCTTGCTGGGCCAGATGATCTAGTATCTGGTCTCCTCTGCCCACGTGTATGTGGAAGTGACTGTGTTATAAAACTGGGACCAAACCGTGGGTTTGATCAACTGAGGGCCCCAAAACCTGGTAAAAAGATAGTAACCACCACAAAATCAAAGCCTGAGGAAGTCATTAAAATAAGTCCAGACAAAGAGGTCCAGAAAGACAAGTCTGTGAACAAGAAAAAGGAAGGAGATGCCAACTCCAAGAAGAAATCACGCACTCTTACATCTGTACTCACAGCAAGAAGCAAGGCAGCATGCGGTTTGACTAAGAAACCGAAGGAGCCGGTTGTTGACATTGATGCTGGAGATGCTGGCAATGAACTTGCTGCTGTAGAATATATTGATGACATTTACAAATTCTATAAGCTGGTTGAGGTTAATGATTTTGTCTGCCTCTCAGACAGAGCTTACACTCATGAACAGATACTAGTCGTTGAGAAAATCATATTAGGCAAGTTGGAATGGACTTTGACTGTGCCTAAACCTTTTGTTTTCCTAGTTCGTTTTATCAAGGCTTCAGTTCCAGATGAGAGGTTGGAAAACACGGCCCATTTTCTTTCTGAGTTGGGGATGATGCATTATGCCACCTTAATGTATTGCCCATCAATGGATTGTGCTAAACTGCTGGTGAGCTTACACTCCACTGTTGGGAATGGAAAGCTTAAGGTTGTGTTTAGAAAGTACTCTGATCCTCAGAGAGGAGCTGTTGCAGTGCTTCCACCTGCTAAAAATCTTCTGCCTGAAGGTTCAGCCTCCTTTGGAGTCTTGAGTTTGAGGAGAACTTTGAATGAAACAAAGAAAGTTGCAAACAAAGAAATTTTGGATTAG 2466 0.4124 MSQPLDSSSSPLSPHSSSSSVLFFCGGASLCFNHSVCFSLSYSYSHTTHIFTMTKISPEIEIKMPMEAVPPVSADVSFISNTFPKYKLGDDNQILEEPIEDNQGPFLKDVIEQEATNLSDQHKRISVRDLASKFDKNLAAAAKLSNEAKLREVASLEGHVLLKKLRDALESLRGRFAGRNKEDVEKAISMVEALAVKLTQNEGELIQEKFEVKKLVNFLKQASEDAKKLVNQEKSFACAEIESARAVVLRIGEALEEQEKVSQASKPQDVDGLVEEVQEARRIKLLHQPSKVMAMEYELRALRDQIREKSIFSIKLQKELTMSKRDEENKSHSYMLDGSEALGSYLRVKPCSDEVPQVSNCSFQWYRLSSEGSWREVISGANKSIYAPDPFDVGRFLQVDIVSNGKKLTLTTNPIQTVSGLGSHVETLLRKSNTDFHVVISQMNGKDHSSHSTHSFNVGRMRIKLCRGWITKAREIYSPSMQLCGVRSDVSNAAKSVFWQARKGLSFVLTFESERDRNVAIMVARKHALDCNVVLAGPDDLVSGLLCPRVCGSDCVIKLGPNRGFDQLRAPKPGKKIVTTTKSKPEEVIKISPDKEVQKDKSVNKKKEGDANSKKKSRTLTSVLTARSKAACGLTKKPKEPVVDIDAGDAGNELAAVEYIDDIYKFYKLVEVNDFVCLSDRAYTHEQILVVEKIILGKLEWTLTVPKPFVFLVRFIKASVPDERLENTAHFLSELGMMHYATLMYCPSMDCAKLLVSLHSTVGNGKLKVVFRKYSDPQRGAVAVLPPAKNLLPEGSASFGVLSLRRTLNETKKVANKEILD* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02678 821 MobiDBLite consensus disorder prediction 593 615 - -
Rops8g02678 821 Pfam Cyclin, C-terminal domain 706 749 IPR004367 -
Rops8g02678 821 Pfam Ig domain of plant-specific actin-binding protein 334 430 - -
Rops8g02678 821 SUPERFAMILY Cyclin-like 705 789 IPR036915 -
Rops8g02678 821 Gene3D - 705 775 - -
Rops8g02678 821 Pfam Coiled-coil regions of plant-specific actin-binding protein 153 320 IPR032009 -
Rops8g02678 821 MobiDBLite consensus disorder prediction 593 618 - -
Rops8g02678 821 PANTHER STOMATAL CLOSURE-RELATED ACTIN-BINDING PROTEIN 1 53 541 IPR039640 GO:0003779|GO:0007015|GO:0010119
Rops8g02678 821 Pfam PH domain of plant-specific actin-binding protein 433 540 IPR041144 -
Rops8g02678 821 Pfam Actin-binding domain of plant-specific actin-binding protein 107 149 IPR032012 GO:0003779
Rops8g02678 821 SMART Cyclin_C_2 706 788 IPR004367 -
Rops8g02678 821 Gene3D - 418 546 - -
Rops8g02678 821 Gene3D - 153 204 - -
Rops8g02678 821 Gene3D - 670 704 - -
Rops8g02678 821 Gene3D - 321 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02678 Rops-Chr8 60620147 60633812 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02678 671 792 Core Cell Cycle Gene Families AT4G37490 41.566 4.52e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02678 K26540 - gmx:100816432 897.886