Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02676 ATGGCTTCAAGACCCATCGTTCCACAACAAGCCAGAGGTGTTGCAGTTGTTGGGGGAGAGAAGCAACAGAAGAAGAATGGTGCAGTAGAAGGAAGGAACCGTAGGGCACTTGGTGATATTGGAAACACGGTCACTGTAAGAGGAGGAGTTGAGGTCAAGCCTAATCGTCCAATCACAAGGAGTTTCTGTGCCCAACTCCTTGCCAACGCACAAGCTGCAGCAGCTGCTGAAAATAATAAGAAAAAGGCTTGTCCTAATGTGGCTGGAGCTCCTCCTGTTGCTGATGGAATTGCAGTGGCTAAAAGAGGGGCTGCAAAACCTGGTCAAAAGAAAGTCACCACAAAACCAAAGCCTGAGGAGGTCATTGAAATAAGTCCAGACAAAAAAGAGGTCCAGAAAGACAAGTCTGTGAACAAGAAAAAGGAAGGAGATGCTAACTCCAAGAAGAAAACACACACTCTTACTTCTGTGCTCACAGCTAGAAGCAAGGCAGCATGCGGTTTGACTAAGAAACCGAAGGAGCCGGTTGTTGACATTGATGCTGGAGATGCTGGCAACGAACTTGCTGCTGTAGAATATATTGAAGACATTTACAAATTCTATAAGCTGGTTGAGAATGAGAGCCGTCCTCATGCCTACATGGACTCACAACCTGAGATAAATGAGAGGATGAGAGCCATACTTATTGATTGGCTGATTGATGTTCACACCAAGTTTGACCTTTCACCTGAAACCCTTTATCTGACCCTCAACATAATTGATCGATTCCTAGCAGTCAAGACTGTGCCAAGGAGGGAACTTCAATTGGTTGGCATCAGTGCCATGCTTATGGCATCTAAGTATGAAGAAATCTGGCCCCCTGAGGTTAATGATTTTGTCTGCCTGTCGGACAGAGCTTACACTCATGAACAGATACTTGTCATGGAGAAAATCATATTAGGCAAGTTGGAATGGACCTTGACTGTGCCTACACCTTTTGTTTTCCTAGTTCGTTTTATCAAGGCTTCAGTTCCAGATGAGAGGTTGGAAAACATGGCCCATTTTCTTTCGGAGTTGGGAATGATGCATTATGCCACCTTAATGTATTGCCCATCAATGTTTGCTGCCTCAGCAGTCTTTGCTGCTAGATGCACTCTGAATATGAGCCCGGTTTGGAATGAGACACTTAAGCTGCACACTGGTTACTCTGAAGAACAACTCATGGATTGTGCTAAACTGCTGGTGAACTTTCACTCCACTGTTGGGAATGGAAAGCTTAAGGTTGTGTATAGAAAGTACTCTGATCCTCAAAGAGGTGCTGTTGCAGTGCTTCCACCTGCTAAAATTCTTCTGCCTGAAGGTTCTGCCTCTGGGAGTGTCTAG 1362 0.4508 MASRPIVPQQARGVAVVGGEKQQKKNGAVEGRNRRALGDIGNTVTVRGGVEVKPNRPITRSFCAQLLANAQAAAAAENNKKKACPNVAGAPPVADGIAVAKRGAAKPGQKKVTTKPKPEEVIEISPDKKEVQKDKSVNKKKEGDANSKKKTHTLTSVLTARSKAACGLTKKPKEPVVDIDAGDAGNELAAVEYIEDIYKFYKLVENESRPHAYMDSQPEINERMRAILIDWLIDVHTKFDLSPETLYLTLNIIDRFLAVKTVPRRELQLVGISAMLMASKYEEIWPPEVNDFVCLSDRAYTHEQILVMEKIILGKLEWTLTVPTPFVFLVRFIKASVPDERLENMAHFLSELGMMHYATLMYCPSMFAASAVFAARCTLNMSPVWNETLKLHTGYSEEQLMDCAKLLVNFHSTVGNGKLKVVYRKYSDPQRGAVAVLPPAKILLPEGSASGSV* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02676 453 SUPERFAMILY Cyclin-like 322 441 IPR036915 -
Rops8g02676 453 Gene3D - 210 321 - -
Rops8g02676 453 SUPERFAMILY Cyclin-like 186 320 IPR036915 -
Rops8g02676 453 SMART cyclin_7 230 314 IPR013763 -
Rops8g02676 453 SMART cyclin_7 327 409 IPR013763 -
Rops8g02676 453 MobiDBLite consensus disorder prediction 1 32 - -
Rops8g02676 453 FunFam G2/mitotic-specific cyclin-1 318 435 - -
Rops8g02676 453 CDD CYCLIN_AtCycB-like_rpt2 323 439 - -
Rops8g02676 453 PIRSF Cyclin_A_B_D_E 1 452 IPR046965 GO:0016538|GO:0044772
Rops8g02676 453 ProSitePatterns Cyclins signature. 225 256 IPR006671 -
Rops8g02676 453 MobiDBLite consensus disorder prediction 126 150 - -
Rops8g02676 453 PANTHER CYCLINS 141 428 IPR039361 -
Rops8g02676 453 CDD CYCLIN_AtCycB-like_rpt1 173 318 - -
Rops8g02676 453 FunFam G2/mitotic-specific cyclin 209 317 - -
Rops8g02676 453 Pfam Cyclin, N-terminal domain 196 320 IPR006671 -
Rops8g02676 453 MobiDBLite consensus disorder prediction 126 149 - -
Rops8g02676 453 Gene3D - 196 435 - -
Rops8g02676 453 SMART Cyclin_C_2 323 440 IPR004367 -
Rops8g02676 453 Pfam Cyclin, C-terminal domain 323 439 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02676 Rops-Chr8 60586324 60589143 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02676 1 444 Core Cell Cycle Gene Families AT4G37490 55.000 1.85e-152 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02676 K21777 - gmx:547919 710.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02676 8 60586324 60589143 Rops8g02676 8 60586324 60589143 ECH