Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02671 ATGGCGCCTCCACTGCCGGAGCCGCCGTCGTCCGATCTGGGCTTCGACGATTTCTCCACCGAGTTCCAGAACCTTCCAATCCCTTCCATGGACTCTCTCTTCCACAACGACGCACCCTTTCCCTCCGATCTCGATTTCGCCATGGATTTCGGTGACAATGGAGACTTTGAGATCACCTTTGACGACCTTGACACACTATGCATCCCCTCCGACGCCGAAGATTTCCTTCTTCCCGATGCATGTAACCCTACCGGCGCTCCAATTTCGCCGATCGTAGACGATCGCAGCGACTCTTCTCCCAAAAATTCCGATTTGCAGGAATCTGATGCTTCTGCGGTTTCCGGCGACGTTTCCAGGTTTTTCAATTCGCAAGCTTCGGATTCGCATGAATCGGTTGATGTTAAAGTTTCGAACTTTCCGTCGCTGGAGTTTGAATCTTGCGACCGGGAAGAGTCTTCGAATGGACCGGTTTCGTCTCAGGGTTCAGGGAATGGTGGTTCGGGTGTATATGAAGCTATGAACTCGCCCTCACCTGATTCTGGCCCTTATGAGAGGGATATTACATCTTCTCATGCACATGCAATTGTGGATAAAGGTATAAAATTGGAGGAAAATGGTAAATTTTCTGATCTTAAGAGGAAGAAAGAGCAAAGTGAAGGAAATGCTGAGAGTAGAACTGCAAAGTACAGAAGATCCTCCTCTGTGGAAAACAAGTCCCAGCCACAATCTCAATCTCAATCTGGTGCCAATGTTGATGATGAGGATGGGGATGAGAAGAGAAAAGCTAGGTTGATGAGGAATAGGGAAAGTGCACAACTTTCTAGACAGAGGAAGAAACATTATGTGGAGGAGCTTGAGGAAAAGGTGAGATCAATGCATTCCACAATTGCTGATTTGAGTAGTAAAGTTTCCTTTGTGATGGCTGAGAATGCAACTCTTAGACAACAATTGGGTGCTGGTGTTATGTGTCCTCCTCCACCAGCTCCAGGGATGTACCCTCATCCTCCCATGGCACCCATGGCTTATCCTTGGATGCCATGTGCTCCTTATGTTGTGAAGCCTCAAGGGTCTCAGGTTCCTTTGGTTCCCATTCCTAGATTGAAGAAGTCTCAGCAACCAGCTTCAGCCTCCAAGAGTAAGAAGTCTGAGGGTAAGAAGACTGAGGTGAAAACTAAGAAGGTTGCTAGCATTAGTTTGTTGGGTTTGTTTTTCTTTATCATGCTTTTTGGTGGGCTTGTTCCTTTGGTGGATTTTAAGTTTGGAGGTTCAGTGGATAATGTTCCTGGTAGTAGGTCTAGCTATGTTAGTGACAGGTTTTATGGTCAAGGTGGAGGGAAGGTTTGGCCTGTAAATGGTCATAGGAATGGATCTGAAAGAGATGAGGAAGTAGGGTTTTCTCATGGAAGGTTTAGTATATCTGATAGAACAAATCATGAGAGAGGCCGGAAACTACGAGAAGATATGCATGAACGGCATGACCCGGATGAATCTGTTCATAAGAACAATTCTAGTGAGCCCCTTTTGGCTTCTTTGTATGTTCCTAGGAATGATAAGCTGGTGAAGATTGATGGAAACTTGATAATCCATTCTATAATGGCCAGTGAGAAAGCCATGGCATCTCAAACTGCTCAGGCAAAGAAGGACAAGAGTGAAACTGGTTTGGCCATTTCTAAGGATTGGGATTCTGCTTTGGCGATTCCTGAAGTTGGAAGAAATAGAGGTCAACATCCACATGTATACAGGGTTACTCCTGAGCAGAGGAGGGCTCTTGGCTCTGGTTCAACTAAAACTTTGAAGGACCATATGAAGTCCTCTGCAACTGATGGTAAAATGCAACAGTGGTTCCGTGAAGGCCTTGCAGGGCCAATGTGGAGTTCTGGCATGTGCACGGAAGTTTTCCAGTTTGATGCTTCTCCAACTCCTGGAGCTATAGTTGCAGCAACATCGGTAGCCAATATTTCTACTGAAGACCATCATAATGCTACCAATGTCAACAAGAGCAGGAATAGAAGAATCCTCCACGGGCTCCCAGATCCACATCCTGCATCCAGTCTGAACATTACTGAAGAACATGCAAGAAATTCACAGAAAGACCACCTCCATGGTAATAAATCCTCTATGGTGGTTTCAGTGCTTGTTGATCCCAGAGAGGCTGGAGATGGTGATGTTGATGGCATGATGACTCCAAAGTCACTCTCTAGGATTTTTGTGGTTGTGCTTATGGATAGTGTCAAATATGTCACTTATTCATGTGGTCTTCCACGGATTTCTCCCTCTCTGGTGACTGCTTATGTATGA 2298 0.4574 MAPPLPEPPSSDLGFDDFSTEFQNLPIPSMDSLFHNDAPFPSDLDFAMDFGDNGDFEITFDDLDTLCIPSDAEDFLLPDACNPTGAPISPIVDDRSDSSPKNSDLQESDASAVSGDVSRFFNSQASDSHESVDVKVSNFPSLEFESCDREESSNGPVSSQGSGNGGSGVYEAMNSPSPDSGPYERDITSSHAHAIVDKGIKLEENGKFSDLKRKKEQSEGNAESRTAKYRRSSSVENKSQPQSQSQSGANVDDEDGDEKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSMHSTIADLSSKVSFVMAENATLRQQLGAGVMCPPPPAPGMYPHPPMAPMAYPWMPCAPYVVKPQGSQVPLVPIPRLKKSQQPASASKSKKSEGKKTEVKTKKVASISLLGLFFFIMLFGGLVPLVDFKFGGSVDNVPGSRSSYVSDRFYGQGGGKVWPVNGHRNGSERDEEVGFSHGRFSISDRTNHERGRKLREDMHERHDPDESVHKNNSSEPLLASLYVPRNDKLVKIDGNLIIHSIMASEKAMASQTAQAKKDKSETGLAISKDWDSALAIPEVGRNRGQHPHVYRVTPEQRRALGSGSTKTLKDHMKSSATDGKMQQWFREGLAGPMWSSGMCTEVFQFDASPTPGAIVAATSVANISTEDHHNATNVNKSRNRRILHGLPDPHPASSLNITEEHARNSQKDHLHGNKSSMVVSVLVDPREAGDGDVDGMMTPKSLSRIFVVVLMDSVKYVTYSCGLPRISPSLVTAYV* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02671 765 MobiDBLite consensus disorder prediction 145 279 - -
Rops8g02671 765 Coils Coil 282 302 - -
Rops8g02671 765 FunFam bZIP transcription factor 49 258 320 - -
Rops8g02671 765 Pfam bZIP transcription factor 259 317 IPR004827 GO:0003700|GO:0006355
Rops8g02671 765 CDD bZIP_HY5-like 260 311 - -
Rops8g02671 765 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 48 757 - -
Rops8g02671 765 SUPERFAMILY Leucine zipper domain 259 317 IPR046347 GO:0003700|GO:0006355
Rops8g02671 765 SMART brlzneu 255 319 IPR004827 GO:0003700|GO:0006355
Rops8g02671 765 MobiDBLite consensus disorder prediction 366 390 - -
Rops8g02671 765 Gene3D - 257 320 - -
Rops8g02671 765 MobiDBLite consensus disorder prediction 151 174 - -
Rops8g02671 765 MobiDBLite consensus disorder prediction 190 232 - -
Rops8g02671 765 MobiDBLite consensus disorder prediction 233 250 - -
Rops8g02671 765 MobiDBLite consensus disorder prediction 78 116 - -
Rops8g02671 765 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 257 317 IPR004827 GO:0003700|GO:0006355
Rops8g02671 765 MobiDBLite consensus disorder prediction 252 279 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02671 20 763 bZIP Transcription Factor Family AT2G40950 49.346 1.51e-177 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops8g02671 bZIP_1 3.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02671 K25783 - gmx:100101871 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02671 8 60541436 60544675 Rops8g02671 8 60541436 60544675 ECH