Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02661 ATGGAGCTCTTCTCAGTTCAATCCTTGTTCGTCCTCTCTCTTATCTTTCTCTATCTCTTTTTCTACTTTCTTCAGGTTCTCACCACCACCACCACAAAACCCCATAACACTGGCTTGAGAATCTACCCTTTAGTTGGAACCCTCCCTGAAATGTTGAAGAATCGGCACCGGTTCCTCGATTGGACCACCCAACTTCTCCGTGACTGCCCTACAAACACCACCTTGTTGCCTCGCCCTGGCAAACTCGGAATCATCTTAACGGCAAACCCGGAAAATGTAGAACACATACTCAAGACCAAATTCGAAAACTACCCAAAGGGCAACCTATTCATTAGCTTCCTCGAAGATTTCATGGGAAGAGGAATCTTCAACTCCGACGGTGACCACTGGAATTTTCAAAGGAAAACCGCTAGCTACGAATTCAACACCAAATCGCTACGGAACTTCTTGATGGAAAACATCACGGTAGAAACCCAAACGAGGTTACTTCCCCTCTTGTCGAAAGCCTCATCAACCAACAAGGTCCTTGATTTACAAGACACGTTGGAACGATTCTCTTTCGATAATGTTTGCATGCTCGCTTTCAACGTCGACCCTCGATGTCTCCACGGTGATGGAACCTTTGGGAAAGAGTTCATGCGTGCGTTCGAGGATGCAGCCACGCTTAGTTCGGCGAGGTTCTTGTACGTGTTCCCATGGCTGTGGAAAATAAAGAAACTTTTCAATGTGGGAACGGAACGGAGGCTTAAAGAATCAATCACCACCGTTCATAACTTCGCCAACGAGATCATACGGTCCAGAATGGAAGACCCCAACAAGTATGAGGATTTGTTGTCCCGTTTCGCGGCATCCGAGGATAACTCACCAGAGTTTCTTCGCGACATCATCATAAGCTTCATACTCGCGGGACGTGACACTACATCTTCCGTACTAAGCTGGTTCTTTTGGATTCTCTCTTCAAAGCCACACGTGAAGAGGAAAATCCTCGACGAGATCGAAACATTTCGTTCCCGAAAAGTTGGAGGGGACCAGCCTTTTGGGTACGAGGAGCTGAAAGAGATGCAGTACTTGCACGCCGCAATTTCGGAGACAATGAGGTTGTACCCTCCCGTACCGTTGGGAGTGAGAGCTTGCTTGAACGACGACGTTTTACCGGATGGTACCATGATGAAGAAGGATTTGTTTATTATGTATCATGCATATGCCATGGGGAGAATGGAGAGTGTGTGGGGAAAAGATTGCACTGAATTTAAGCCCGAAAGGTGGTTAGAAAACGGTGCATTCCGAAGTGAAAGTCCGTTTAGGTTTCCGGCATTCAACGCCGGTCCTAGAACGTGTCTTGGGAAGGATTTAGCTTATATTCAGATGAAGTCCATTGTAGCTTCTGTGATGGAGCGGTTTGAGATCGATGCAGTGGGTAAGGACACGTGTCCTGAGCTTCTTTTGTCTTTCACTTTAAGGATTAAAGGAGGGTTGCCCGTGAGGGTAAGGAAGATACAAAATGGTACTTAA 1512 0.4669 MELFSVQSLFVLSLIFLYLFFYFLQVLTTTTTKPHNTGLRIYPLVGTLPEMLKNRHRFLDWTTQLLRDCPTNTTLLPRPGKLGIILTANPENVEHILKTKFENYPKGNLFISFLEDFMGRGIFNSDGDHWNFQRKTASYEFNTKSLRNFLMENITVETQTRLLPLLSKASSTNKVLDLQDTLERFSFDNVCMLAFNVDPRCLHGDGTFGKEFMRAFEDAATLSSARFLYVFPWLWKIKKLFNVGTERRLKESITTVHNFANEIIRSRMEDPNKYEDLLSRFAASEDNSPEFLRDIIISFILAGRDTTSSVLSWFFWILSSKPHVKRKILDEIETFRSRKVGGDQPFGYEELKEMQYLHAAISETMRLYPPVPLGVRACLNDDVLPDGTMMKKDLFIMYHAYAMGRMESVWGKDCTEFKPERWLENGAFRSESPFRFPAFNAGPRTCLGKDLAYIQMKSIVASVMERFEIDAVGKDTCPELLLSFTLRIKGGLPVRVRKIQNGT* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02661 503 SUPERFAMILY Cytochrome P450 38 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02661 503 CDD CYP86A 76 492 - -
Rops8g02661 503 Gene3D Cytochrome P450 37 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02661 503 Pfam Cytochrome P450 42 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02661 503 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02661 503 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02661 503 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02661 503 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02661 503 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02661 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Rops8g02661 503 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02661 503 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02661 503 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02661 503 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02661 503 PANTHER CYTOCHROME P450 24 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02661 Rops-Chr8 60396419 60397930 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02661 38 498 Cytochrome P450 AT3G56630 61.277 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02661 - - gmx:100812147 689.493