Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02658 ATGGAAGGAGATTGGTGTTGTGGGAGTTTCTTTCAGAGGTGCAAGCCTTACATAGCCATGATTTCTCTGCAATTTGGTTTTGCTGGTATGAACATAATCACAAAGGTTTCCCTCAACCGTGGGATGAGCCACTATGTGCTTGTGGTTTATAGACATGCCTTTGCTACAGCAGCTATTGCTCCTTTTGCTCTTGTTCTTGAGAGGAAAGTAAGACCCAAGATTACATTTCTTTTGTCCATTCAAATGTTCGTGTTGGGCCTCCTTGGGCCTGTGATTGATCAGAACTTATACTATGCTGGGTTGAAATTCACTTCCCCAACATACTCATGTGCTATAAGCAACATGCTCCCTGCAATGACATTTGTGATGGCAGTTATTTGCAGGATGGAGAAGGTGGACATGAGAAAAGTAAGATGCATAGCAAAGGTGATTGGAACAGTAGTTACAGTTGCCGGGGCCATGTTGATGACATTGTACAAGGGGCAAGTGATCAAATTTTTGGGGTCTCAATACATGCATCATCCCAGAAACTATGAGCCTGAAAACACTACTGATTCAGCTGAAAAGGATTGGGTTAAGGGTTCTATTCTTCTCATAATTGCTACCTTTGCTTGGGCTTCTTTCTTCATCCTTCAGGCGATGACATTGAGAAAATACCCTGCTCAGCTCTCACTCACAGCAATAGTGTGTTTCTTGGGGACACTTCAATCAACTGCAGTTACCTTTGTCATGGAGCACAAGCCATCTGTTTGGACCATTGGCTGGGACATGAATCTTCTTGCTGCAGCCTATGCTGGTATAATATCATCAGGAATTACCTACTATGTTCAAGGGATTGTCATGCAAAAGAAAGGACCTGTTTTTGTTACTGCTTTCAGCCCTTTGATGATGATCATTGTGGCAATCATGGGCACTTTCATTCTTGCAGAAAAAATATATCTTGGAGGAGTCATTGGAGCTATTTTGATAGTAATAGGACTTTACTCGGTTCTATGGGGCAAAAACAAGGAGCAAGAAGAGAAAACAGTAGAGGCAATCACTGACTCAATTAACTGCTGTTCAAAAACTGTGATAGAAGGTGCTGAAGTAAATGACATTGAGATGCAAAAGGGTGAAGCTACCAAAGAGTTAAGGTTAACCGTTAGTGTTCCAAAAGCTTAA 1161 0.4177 MEGDWCCGSFFQRCKPYIAMISLQFGFAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFALVLERKVRPKITFLLSIQMFVLGLLGPVIDQNLYYAGLKFTSPTYSCAISNMLPAMTFVMAVICRMEKVDMRKVRCIAKVIGTVVTVAGAMLMTLYKGQVIKFLGSQYMHHPRNYEPENTTDSAEKDWVKGSILLIIATFAWASFFILQAMTLRKYPAQLSLTAIVCFLGTLQSTAVTFVMEHKPSVWTIGWDMNLLAAAYAGIISSGITYYVQGIVMQKKGPVFVTAFSPLMMIIVAIMGTFILAEKIYLGGVIGAILIVIGLYSVLWGKNKEQEEKTVEAITDSINCCSKTVIEGAEVNDIEMQKGEATKELRLTVSVPKA* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02658 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 158 - -
Rops8g02658 386 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020
Rops8g02658 386 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020
Rops8g02658 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 336 - -
Rops8g02658 386 PANTHER WAT1-RELATED PROTEIN 15 341 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02658 Rops-Chr8 60319702 60321894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02658 1 384 Nodulin-like Gene Family AT5G07050 62.821 6.54e-173 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02658 - - gmx:100793545 646.351