LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops8g02648	ATGGGAAAGGTCGAAGAAGAACAACAATCGTTGCCACGTGGCGATGTCTCCGCGGATCCGCAGCAAAATGCGGAGGCGGAGTGTCGGTGCAGGTGTTCTCGGATTCGGAAACTCGTTGGTTTCAGATGCATTCTCGTACTGCTCTTGTCTCTCGCAGTGTTCCTCTCTGCTTTGTTTTGGTTGCCTCCTTTTCTTCGCCTCGCAGATCAGAAGAATCTGCATGAAGGTTCTAGATACAAAGATCATGATATTGTTGCAAGCTTTATTGTTAATAAGTCAGCCTCTTTGCTAGAAGATAACATCTTGCAGCTCACAAATGAAATTTTTGACGAGATAGGAGCTCCCTCTACCAAAGTGGTCATCTTGTCTCTAGATGCCTTACCTGGGCCAAACAAGACAAAAGTGGTGTATGCAGTGGATCCTGATGGTGAATACTCAGAAATGTCTTCACCTGCCATTAGTTTGATAAGAGCATCATTTACATCCCTGGTTATACAGCAATCAGTTCTCCAGCTCAGTTCTTCATCCTTGTTTGGGGATCCCTTCTCTTTTGAAGTGTTGAAATTTAAGGGGGGAATTACTATAATTCCACAACAGAATGCATTTCCTCTGCAGACAGAGCAAACACAATTCAACTTTACTTTGAATTTCCCCATTTATCAAATACTATCAAATTTCGACGAGCTGACAAGTCAGCTAAAGTCTGGATTGCACCTGGCATCCTTTGAGAACTTGCATGTTGTCTTATCGAACTCTGAAGGCTCAACAGTAGATTCTCCTACTGTTGTTCAGTCCTCTGTTCTACTTGCAATTGGGATTACTCCATCAAAACAGAGGCTAAAGCAACTGGCACAAACCATCATGGGACCTCATAATCTTGGCTTGAATAACACTGAATTTGGTAGGGTTAAGCAGGTTCGACTTTCATCCATCTTGCAGCATTCCCTTCATGGCAATGATGGTAGTGGCTCTGCATGGTCACCATCTCCTGCTCCTCTGCCTCATCCACCACACCACCACCACCACCATCGACATCAGCATCATCATCATCACCACAACGCGCACCTAACTCCTGCATCTTCTCCTATACCTGCATCTGCACCTGCACCTACAGCTGGGGAGGATGTAACTCCACCTGAGGTTGGTTCTCCTGCTGCTACAAAAAGTGTGCCTGCACCACGGAGTTCTCAAGCTCAGCCTCCTGATTGTCCATTTGAGCGTCGAAAGAGGTCAAGCCGTAATGCTTGGAAGCATGCTCATCTAACACCTGCTGTTGCCCCTAGTATTGATCCACATTATCCTGTTCCTGTTGCCTCACCAAAACCACAGGTTGAACCACCGGCACCTGTCTCTCATTCAGTACCTGCTTTGAGTCCTTTACCAAATGTAGCTTATGCTCGTGCTGAGCCCCCTCCTAAGAATGAACCAGCTGCAGAACATTCTCACATGCATTTTCATGGGCCATCGATATCTTCATCTTCTTCTGCAGGTTGTCTTGGAACTGTTAAATGGGCATCTTTAATGTTTGTAGTACTTGTGTTACATGTGTAA	1551	0.4552	MGKVEEEQQSLPRGDVSADPQQNAEAECRCRCSRIRKLVGFRCILVLLLSLAVFLSALFWLPPFLRLADQKNLHEGSRYKDHDIVASFIVNKSASLLEDNILQLTNEIFDEIGAPSTKVVILSLDALPGPNKTKVVYAVDPDGEYSEMSSPAISLIRASFTSLVIQQSVLQLSSSSLFGDPFSFEVLKFKGGITIIPQQNAFPLQTEQTQFNFTLNFPIYQILSNFDELTSQLKSGLHLASFENLHVVLSNSEGSTVDSPTVVQSSVLLAIGITPSKQRLKQLAQTIMGPHNLGLNNTEFGRVKQVRLSSILQHSLHGNDGSGSAWSPSPAPLPHPPHHHHHHRHQHHHHHHNAHLTPASSPIPASAPAPTAGEDVTPPEVGSPAATKSVPAPRSSQAQPPDCPFERRKRSSRNAWKHAHLTPAVAPSIDPHYPVPVASPKPQVEPPAPVSHSVPALSPLPNVAYARAEPPPKNEPAAEHSHMHFHGPSISSSSSAGCLGTVKWASLMFVVLVLHV*	517

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops8g02648	516	MobiDBLite	consensus disorder prediction	335	355	-	-
	Rops8g02648	516	MobiDBLite	consensus disorder prediction	315	413	-	-
	Rops8g02648	516	PANTHER	F20B24.21	1	509	-	-
	Rops8g02648	516	MobiDBLite	consensus disorder prediction	469	488	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops8g02648	Rops-Chr8	60148914	60153841	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops8g02648	1	312	C3H Transcription Factor Family	AT3G10810	53.503	4.70e-89	280

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops8g02648	-		-	gmx:100792490	675.626