Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02641 ATGGGACGAACTAGGCTTTTGGTGTCTGATTTTGTTCTGTCTTTCATGTGGGTGTGGTCTGGTGTTCTGGTTCGGATATTTGTCTTCAAAATTCTGGGATTTGGTCATGACCATGCTGGTGAGATTGTGAAGGTTGCTTTCTCCATTGCCAACATGTTCTTCTTTGCATTCCTTGTCAAGGTTACCCGAGGTGGGGCCTACAATCCCCTCACTGTTTTGTCTTCTGCTATCTCTGGTGATTTCAACAACTTCCTTTTCTGTGTTGGTTCTAGAATCCCCGCTCAGGTGGTTGGATCTATTGTTGGAGTTAAACTTATGATTGATACCATTCCTGAAGTAGGACGGGGACCACGTTTGAATGTTGACATTCATCAGGGTGCATTGACAGAAGGACTACTAACATTTGCAATTGTAACCATTTCACTTGGGCTTGCCACAAAAATTCCTGGAAGTTTCTTCATGAAGACTTGGATCTCCAGCCTCTCCAAGTTAACACTTCATATCCTTGGCTCTGATCTAACTGGTGGTTGTATGAACCCTGCATCTGTAATGGGATGGGCTTATGCTCGTGGGGATCACATAACAAAGGAGCACCTCCTTGTCTACTGGCTTGCCCCCATAGAGGCAACTATTTTGGCAGTGTGGACATTCAAATTTCTAGTACGACCTGTAAAAGAAGATAAAACAGGCTCAAAAAGTAAATCGGATTGA 711 0.4374 MGRTRLLVSDFVLSFMWVWSGVLVRIFVFKILGFGHDHAGEIVKVAFSIANMFFFAFLVKVTRGGAYNPLTVLSSAISGDFNNFLFCVGSRIPAQVVGSIVGVKLMIDTIPEVGRGPRLNVDIHQGALTEGLLTFAIVTISLGLATKIPGSFFMKTWISSLSKLTLHILGSDLTGGCMNPASVMGWAYARGDHITKEHLLVYWLAPIEATILAVWTFKFLVRPVKEDKTGSKSKSD* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02641 236 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops8g02641 236 PRINTS Major intrinsic protein family signature 87 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops8g02641 236 PRINTS Major intrinsic protein family signature 200 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops8g02641 236 PRINTS Major intrinsic protein family signature 160 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops8g02641 236 PRINTS Major intrinsic protein family signature 129 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops8g02641 236 PANTHER AQUAPORIN SIP2-1-RELATED 1 236 IPR044226 GO:0015267
Rops8g02641 236 Pfam Major intrinsic protein 5 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops8g02641 236 Gene3D Glycerol uptake facilitator protein. 3 235 IPR023271 -
Rops8g02641 236 SUPERFAMILY Aquaporin-like 4 227 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02641 Rops-Chr8 60006716 60011728 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02641 1 236 Major Intrinsic Protein MIP AT3G56950 64.135 1.68e-112 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02641 K09875 - gmx:100786138 412.535