Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02637 ATGGAACACAATTTGGGTCAAGATTCTGTACCTGCACCTGGGTCATTTGATAAGTCTAGGGTTTTAAATGTTAAGCCATTGAGAACTCTTGTCCCTGTGTTCCCTTCACCATCTAACCCCTCTTCATCTTCAACACCACAAGGTGGTGCTCCTTTTGTTTGTGTTTCACCTTCTGGTCCTTTCCCTTCTGGGGTTGCACCCTTTTACCCTTTCTTCATCTCGCCGGAGTCCCAGAGACTTTCTGAACAAAATGCACAAACTCCAACTGCTCAACGTGTACCTGCAGGGCCAATATCTAGTGCAGTTCCTATTAATTCATTTAGGACACCAACTGGGGCTGCAAATGGAGATGTTGGTTCGTCGCGGAGGAATAGCCGGAGTCGTGCACAGTTCACGGAGGAAGAAGGATACAATAATGTTGAGGTGAATGAAGTTGATGCTGAAGATGGAACTGGGGATGGGAGGTCAAAGCGCAAGTCGCAGAAGAGGGCAAAGGGACGGCGTGGCGGCGGTGGTGGTTCTGCTGCTGATGTTGATCCTGATGCACTGGTTGATGATATTCTCAAATCGATTAACCCCATAGTTTTTGAAACACTAAACCAACCTGATGGCAGCAGGGATGCGGTCACATATACACTTATGGTATATGAAGTGCTACGAAGGAAGCTTGGACAAGTTGAAGAGACAGCAAGGGAAGCTCATTCTGGAGCAAAACGGCCTGATTTGAAGGCAGGTACACTTATGATGAGTAAAGGGGTTCGGACTAACAGCAAGAAACGTATTGGAGCTGTGCCTGGCGTTGAGATTGGGGATATTTTCTTTTTCAGATTTGAGTTGTGCTTATTGGGATTACATGCTCCTTCCATGGCTGGAATTGATTACTTGGGTTCCAAAATCAGTCTAGAGGAAGAGCCGTTAGCTGTCAGTATTGTCTCGTCTGGAGGGTATGAAGATAATGTGGATGATGGGGATGTGTTGATTTACAGTGGCCAAGGTGGGGTTAGCCGTGATAAGGGAGCAAGTGATCAAAAGCTTGAAAGGGGTAATCTTGCATTGGAGAAGAGCCTGCATAGAGGTAATGAAGTGAGAGTAATTAGGGGTTTGAGGGATGTAGCACATCCAACTGGGAAGGTATATGTCTATGACGGTCTTTACAAGATTCAGGATTCATGGGTGGAGAAAGCAAAATCTGGTTTCAATGTATTTAAGTATAAATTAGTCAGGTTGCCTGGGCAGCCTGAAGCATATATGATATGGAAATCCATTCAACAATGGACTGAGAAGTCTGCTTCAAGAGCAGGGGTTATCTTGCCTGATCTTACTTCTGGGGCTGAAAACTTACCAGTCTGTCTTGTGAATGATGTTGATAACGAGAAGGGGCCTGCTTATTTTACTTACTCCCCTGCTCTCAAGAATTTGAAGCTAATAGCTCCTGTGGAATCTTCTGCTGGATGTTCTTGTATTGGTGGATGTCAACCTGGCAATCATAACTGTCCTTGCATTCAAAAGAATGGAGGTTATCTCCCATATTCTGCGGCTTCGATACTTGCGGACCTAAAATCTGTAGTATATGAGTGCGGCCCCTCCTGTCAGTGCCCTCCTAATTGCCGAAATCGGGTTTCCCAAGGTGGCTTGAAATTTCGTTTGGAGGTGTTTAAAACCAAGGATAAAGGTTGGGGTCTAAGATCATGGGATCCTATTCGTGCTGGAACTTTCATATGTGAGTATGCAGGGGAAGTCATAGATAATGCTAGAGTGGAGGAGCTTGGTGGTGAAAATGAAGATGACTACATTTTTGATTCTACTCGCATTTATCAGCAACTGGAAGTTTTTCCTGGGGATGCTGAAGCTCCTAAGATCCCATCCCCCCTTTATATATCAGCAAGAAATGAAGGGAATGTTGCTCGGTTTATGAATCACAGCTGCTCTCCAAATGTATTATGGCGACCGGTCTTGCGCGAAAATAAGAATGAAACAGATCTCCACATTGCTTTCTATGCAATCAGACATATCCCTCCTATGATGGAGTTAACTTATGATTATGGGATAGTTCTTCCTCTCAAAGTAGGTCAGAAGAAAAAGAAATGCTTATGTGGATCTGTGAAATGTAGGGGTTACTTTTGTTAA 2127 0.4438 MEHNLGQDSVPAPGSFDKSRVLNVKPLRTLVPVFPSPSNPSSSSTPQGGAPFVCVSPSGPFPSGVAPFYPFFISPESQRLSEQNAQTPTAQRVPAGPISSAVPINSFRTPTGAANGDVGSSRRNSRSRAQFTEEEGYNNVEVNEVDAEDGTGDGRSKRKSQKRAKGRRGGGGGSAADVDPDALVDDILKSINPIVFETLNQPDGSRDAVTYTLMVYEVLRRKLGQVEETAREAHSGAKRPDLKAGTLMMSKGVRTNSKKRIGAVPGVEIGDIFFFRFELCLLGLHAPSMAGIDYLGSKISLEEEPLAVSIVSSGGYEDNVDDGDVLIYSGQGGVSRDKGASDQKLERGNLALEKSLHRGNEVRVIRGLRDVAHPTGKVYVYDGLYKIQDSWVEKAKSGFNVFKYKLVRLPGQPEAYMIWKSIQQWTEKSASRAGVILPDLTSGAENLPVCLVNDVDNEKGPAYFTYSPALKNLKLIAPVESSAGCSCIGGCQPGNHNCPCIQKNGGYLPYSAASILADLKSVVYECGPSCQCPPNCRNRVSQGGLKFRLEVFKTKDKGWGLRSWDPIRAGTFICEYAGEVIDNARVEELGGENEDDYIFDSTRIYQQLEVFPGDAEAPKIPSPLYISARNEGNVARFMNHSCSPNVLWRPVLRENKNETDLHIAFYAIRHIPPMMELTYDYGIVLPLKVGQKKKKCLCGSVKCRGYFC* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02637 708 Pfam SET domain 558 682 IPR001214 GO:0005515
Rops8g02637 708 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 109 707 IPR025794 GO:0016571
Rops8g02637 708 MobiDBLite consensus disorder prediction 34 51 - -
Rops8g02637 708 ProSiteProfiles YDG domain profile. 262 408 IPR003105 -
Rops8g02637 708 ProSiteProfiles SET domain profile. 547 682 IPR001214 GO:0005515
Rops8g02637 708 Pfam SAD/SRA domain 261 412 IPR003105 -
Rops8g02637 708 SMART set_7 547 688 IPR001214 GO:0005515
Rops8g02637 708 MobiDBLite consensus disorder prediction 78 179 - -
Rops8g02637 708 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 245 427 - -
Rops8g02637 708 Gene3D - 245 429 IPR036987 -
Rops8g02637 708 Gene3D SET domain 430 707 IPR046341 -
Rops8g02637 708 ProSiteProfiles Pre-SET domain profile. 483 544 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Rops8g02637 708 SUPERFAMILY SET domain 446 705 IPR046341 -
Rops8g02637 708 MobiDBLite consensus disorder prediction 31 51 - -
Rops8g02637 708 SMART preset_2 437 531 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Rops8g02637 708 MobiDBLite consensus disorder prediction 78 94 - -
Rops8g02637 708 SUPERFAMILY PUA domain-like 244 427 IPR015947 -
Rops8g02637 708 Pfam Pre-SET motif 441 539 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Rops8g02637 708 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 93 700 - -
Rops8g02637 708 SMART G9a_1 257 412 IPR003105 -
Rops8g02637 708 ProSiteProfiles Post-SET domain profile. 692 708 IPR003616 -
Rops8g02637 708 MobiDBLite consensus disorder prediction 102 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02637 Rops-Chr8 59966688 59972057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02637 1 707 Su(var)3-9 homologs AT1G73100 49.041 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Rops8g02637 SAD_SRA 8.6e-50 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02637 K24405 - gmx:100805932 1211.05