Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02633 ATGGAACAACGAGAGCAAGAGGAAGAGCGCCACCTCATCAGTGGCGGAACTAATAATCCCGTGCTCCGCGCCTTCATGCTCCCCTTCGCTCGCCTCGTCGCCGCCGATCACCGATCGGACGACGGCGTCGACTGCGACGGCGATGGATGCGCGTACTCGAGGCCGGTGATGGTTGTGGACATGGTGTGGAACCTGGCGTTCGTGGTGGTTGCCGCCGGCGTGCTTCTCTCGACGTTCGGCGAGCGACCTTCCACTCCTCTGAGGCTTTGGCTCTGTGGCTACGCCTTCGAGTGCGTTGTTCACATGACTTTTGTTTACTCTGAGTATCGCTCTGCAACTCGTGATTCCTTCTCTCACACTCCTCCCTACAGCATTGTGAAGAAGCTAGAGCCTATGAACACTCTGGTATCATCTGTTTGGTGGGTGTTTGGATTTTACTGGATTGTTGTGGGGGGCCAGGTGCTTCTGGAAGATTCTCCACGTCTGTACTGGTTAACGGTGGTCTTTCTAGCCTTTGACGTATTTTTTATTATCTTTTGCATTGGGATGGGATGTATAATTTTCTTTGCTCTCTTCTGCATCATCCCAATAATAGCATTAGCTTATGCTATAAGACTCAGAGAAGGTGCATCAGAAGAAGATATCAGGTCACTTCCTAAGTATAGATTTAGTCACTCAAATTCACTGGTGATTGTTGATGACAACAAGAAGCAACTTGTTAATGCAAGAATCGATTCATGCAACGGAAGCCATATTAGTGAACTTTTTCTCCATCCAGATGATTCTGAATGCTGTATCTGCCTATGTCCATATGGTGTTGGAACAGAACTATATCGCCTTCCTTGTACCCACCATTTTCATTGTGGATGCATCAGCCGTTGGCTTCGGACAAAAGCAACCTGCCCGCTCTGCAAATTTAATATCCGTAGAGGTGATACATTGGTTTGA 948 0.4831 MEQREQEEERHLISGGTNNPVLRAFMLPFARLVAADHRSDDGVDCDGDGCAYSRPVMVVDMVWNLAFVVVAAGVLLSTFGERPSTPLRLWLCGYAFECVVHMTFVYSEYRSATRDSFSHTPPYSIVKKLEPMNTLVSSVWWVFGFYWIVVGGQVLLEDSPRLYWLTVVFLAFDVFFIIFCIGMGCIIFFALFCIIPIIALAYAIRLREGASEEDIRSLPKYRFSHSNSLVIVDDNKKQLVNARIDSCNGSHISELFLHPDDSECCICLCPYGVGTELYRLPCTHHFHCGCISRWLRTKATCPLCKFNIRRGDTLV* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02633 315 SUPERFAMILY RING/U-box 256 309 - -
Rops8g02633 315 Pfam Ring finger domain 263 305 IPR001841 -
Rops8g02633 315 ProSiteProfiles Zinc finger RING-type profile. 264 305 IPR001841 -
Rops8g02633 315 SMART ring_2 264 304 IPR001841 -
Rops8g02633 315 PANTHER TARGET OF ERK KINASE MPK-1 47 309 - -
Rops8g02633 315 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 238 312 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02633 Rops-Chr8 59888267 59892255 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02633 51 312 C3H Transcription Factor Family AT1G68070 46.071 7.69e-86 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02633 - - gmx:100808066 491.886