Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02627 ATGAACCAACTAAAGAATTCAAGCACGTCAAGAACAATTGCTAGAATTCCATACTTTTGGACGTTGGGGGAAAAGTTGGAATTTGCCTGCAAATTATGCTACTCACAAGATGGATCTCGTGCAATTTTGCATAGAAGTGACCCACACACATTCAAGTTACCCCACAAGCTGCTTGAGTGTTCTCTTGTTGTAATCGGATTCAATTCGCTGGTTACTGTTACGCTCATAAAGCTATACATACATACAGTGTCTCAATCTCATTCTAAACACAATTTGGCTTTCTCTGCATTCTCCAATTATTATCACTCCTTGTTGGCTTCCATTACTGGCTCCCCTGTTCTTCATTCAACACTCATCACCATCTCTTATTCATTCAAAAGCTGCTCATTCTACAGGTTGACCCAATTGAAGTTTCCCCACAAGCTAAACACAATTTGGCTTTGCTCTGCATTCTCCAATTATTATCACTCCTTGTTGGCTTCCATTGTTGGCTTGGCTACCCTATCTGTTCTTCATTCAACACTCATCATCGACATCACTTGTTATTCATTCAAAAGCTGCTATCTATCCCTCGAGGCTGCTCATTCTACGAGACATCTTTATTTAAGGCAAAGGAAGATGGATTGTCTTACCGAACTAGCAAAAGAACTCGTCTCAAAACTTGGAGATTTGGTTATAGAGTCTACTGTTAAGCATTTTAAATATCTCATCCAACACAAAGAAATTATTGCCAATTTAAATGAAGAATACGAGAAGTTGAAGGGTTTGAAGCAAGCTTTGCAAGGGACGGTGGACGAAAAAATAAGGAATGGACATGAAATTGCACCTAATGTTCAAAACTGGCTCGATGGCGTGGGAGCTATTGAAAAAGAGTTTCAAAGATTCTATGAAAATGAAGTGAACAAGAACAAGAAATGCTTTGGTGGGAAGTGTCCAAATTTGGCATTTAATTACTCATTGGGCAAGCGAGCCACTAAAAGAACAGAAAATATTACAAGCTTGATGGAAGATGGAAACAAATTTCGGTATATATCCTACCGCAAAGCTCCACCACCACTTGGATCTACCTTCACAAAAGATTTTATAAAGAGCTTTGAGTCCAGGAAAAAAATTATAACAAAGGTCATTGAGAAACTGAAGGATGATGGGATCAAAAGGATTAGTATTTGCGGGATTGGTGGAGTCGGAAAAACCACACTGGTGAAAGAATTGATCCAAATTATAGAAAAAAGTCAACTTTTCGTTAAAGTTGTGATGGCAGTGGTATCTCAAAATCCAAATTACAGGATGATCCAAAGTCAAATTGCCGATGGTTTGGGCTTGAGATTTATAAGTGAGAGTATGGAAGGAAGAGGAAGGCAATTACTTGCGAAGTTGAAGGAAATTGGCAAGGTCCTAATAGTGTTGGATGATGTTTGGGACGCGCTAGATTTAGAGTGTATTGGACTTCCTTCTCGAGAAGATCAGAAAGGTTGCAAAATATTATTCACGTCACGCAATGAAGAAGAGTGTCGAAAGATGGGAAGTCAAGAGAATTTCGTTGTTTCTCTTTTGTCTGAGGATGAAGCCTGGTATCTATTTCAGGCGATGGCAGGTGACATTGTAGAAAAACCTGATATCCATCCAATAGCAAAACAGGTTGCGAAGGAATGTGGACGCTTGCCTCTTGCTATTGTGATTGTTGGAAAAGCACTTGAAAATAAAGAAAAGCCTAAGTGGGAGGATTCACTTGAACAACTAAGAAGTTCTCAACCATCTTCCTTATCAGATGTGCCAAAATTAGTGTACTCAAGCATCGAGCTTAGTTTCAATTTTTTGGGTAGCAGAGAACACAAATTCTTTCTTATGCTTTGTAGCCTTTTCCCTGAAGACTTTGACATTCCTGTTGAAAGTTTATTGCGTCATGCAATGGGCTTAGGATTGTTTAAAGCCATTAGTGCATCATGGAAAGCAAGGAATCGAGTGCATACTTTAGTGGGCAAGCTAAAGAGATGCTTCTTGTTGATGAATAGTGATGTTCCAGGGTGTGTGAAGATGCACGATATTGTACGTGATGCTGTCATATCAGTTGCGTCTAGAGATGAACATGGGTTTGTGGTACTAAATAGCATGAAGAGGTTAAAAGAAGAAAAATTGAATGACGCCATTGCAATATCACTTATCTTGGATGAGATGGAGGAGTTGGAGAATGGCTCAGAGTATCCAAAATTTCAACTTCTACAAGTACGATCACAAGGTGGAAAACCAATCTCATGGCCTGAACATTTCTTCAAAGGCATGCCTAAACTCAAAGTTTTAACTATGCAAAACTTGTGCATTCCAAAATTGCAAGCTCTGTTCCAAGCCTCCGGTAATCTTCATACGTTGCAAGTGGAATATTGTGATGTCAGAGATGTATCCGTAATTGGTAAGGAACTTATACATTTAGAAATCCTAAGTTTTGCACACTCTAATATTGAAGAACTCCCAACTGAGATCGGAAACTTAGGCTTCCTAAGATTGCTGGATTTGACAGGATGCAACGATCTTAACTTTATTCATGCTAATGTCTTGTCGAGATTATCTCGTTTGGAGGAACTGTATTTGAGGATAGAAAATTTTCCTTGGAAGAAAAATGATGTTGTGATCAAAGAGTTGCAAAATATGTCTCATCAGCTAAAGATTGTTGAGATGAAGGTAAAAGGGTTTGAAATTTTAGTCAAAGATTTGGATTTCAAAAGCCTAGAAAGATTTTGGGTTTATGTGGCTCCTTATACTAATCTTCAACGTTCTCAATATTTGGAGTCAAATACATTGGAAGTCACTGCTATAGATTATAACTCTATTAAGAGCATGTTGATGATCATGCAATTGGTTAAGAAATGTGAGATTCTCATACTAAGAAAGGTGAAAGATTTAAAAACTATTTTCGGCGAGTTAAGCAATTCCGAACTTCCATACTTGAAAGATTTAAGGATTGATTCATGCTCCAATCTGGAGTGTCTCATAGATCATACTCTTCGTAGCAATGCCTTCCCACAAATCCAATCATTATCTCTCAAAAATCTTAATAATTTAAGAGAGATTTGTTATGCATCTGACTACCATGAAGTGAAGGAATCCATGCTTAAGTTCTTAAATTTGGTGAAACTGGAATTAACATACCTTCCAAGCCTCATTGGTTTCAGCAAAGCTTTTGATTTGAATGACCCCCATCATATACAGGGAACGAGTCATACTCAATCTACTGAATTGACTATGAGTGTCAAGTTGTTTTCGTCTAACTGGATGCAACAATTTCCAAAATTAGAAACACTCCTGTTACAAAGTTGTACTTCCATAGTCATGGTGTTTGATATGCAAGGATATTCAGATTTAGATAGCCAAGTATTTCCTCAATTGAAAGAAATCAAGATTGTTGACCTTAATCAGTTAAGATGTGTGTGGAGTAAAGCCATACATGGTGTTCAAGGTTTTGATAATTTGAGATCTTTGACAATTTCAAACTGTGACTCTTTAAGACATGTATTTACTCCTACTATTGTTAAAGCAATCACTAAGTTTGAGCAATTGGATATAAAGTCTTGCAAGTCAATGGAGAATTTAGTGATTGATAATGAAGATGATGAAGAGGGTGATCATACAAACAAAGAGAAAGTGAACATTATCTCGTTTGATAAACTAGATTCCTTAACACTTTCAACACTCCCAAGTTTTGTGGGTATCTGTTCAAATTCTTATGAGTTGGAATTGCCATCATTAAGAAAGTTGGAAATCGATGATTGTCCAAAGCTGAATATATCCTTTTGGCTAACTGCACATGCAAAGCTCAACAATGGCACTGGTTCTGAAAACTTTGAAAAAAACTATTCAAGGTCTTCTAATTGGCATTTTGGGTGCACATCATTGTGTTCTAAATTAGTTCGCCAAAGCAATACAAATAAGAAAAGTAATAAGACTGTATTGTTACCACATGATCAGGTTCCTTCCATTTCCGTAAAGAAGACCAAGGTAGAAGTGGGCCATTTGCCTATTCTTGAAGAACTTGGTGTAAGAAATTGTGATTTGCATGATAAATTAATGTCACAAGAAGAAGATGAAACGAGGATAAGACGTGGCCCAGTGATAGATGGGCATTTGTTTCCAAACTTAAAATCCATAACCATGCAGAGCTGCAACATGATAAGTGTCCTGTTATCTCCTTCGTCCTCGAGATGTCTTCGGTGTCTAGAGAAGCTACACTTAAAGAATTGCAAAAACATAGAAGCAATTGTATCTCAAGAAGAAGCAGAAGCAAATAAGATTTTGTTCCCTGGATTGCAGTGTCTACTTCTTGTAGACCTACCCAACATCAAGGCCTTCTGCCAAGCTTCTTATGATTTCGATTTTCAATCACTGAAAGAAGTGACAATTAAAGATTGTCCCAAGATGGAAGTGTTTTCACAAGGATCTTCTCATACACCTAAGCTTGAGGATGTCACCATGGAGATCAAATTGCACAGCAGCAATTATATAAAGAATAAAGACCTGAACGCCACTATACAAGGATTTAAAGCATTTGTGGCATTACAAGGATATGAGATGCTGAGGTGGACTAAGCTCCGTAACGAAGGAATGTTTGGATACTTCATGAAAAACTCAGAAATAAATATTACAGAATTTCATAACCTATCAAAGCTTGTTTCGTTCAATGAGATACAAATGCTTCAACATGTGAGGAAACTCACCATAGAAGATTGTGATTCACTAGTTGAAGTGTTCGAATCAGAAGGAGGAGAAGGTGCAAAGAAAAGGGATGCCACCACACATTATCAGCTAGAAGATATGAGATTGGAAAATTTGCCAAAACTGAGTCACATATGGAAAGACAATATTATTAAAGGGGTTGTGAGCTTCCAGAAGCTAACATCAATTTCTATTAGACGATGCCACAGTTTGAAGAGTTTGTTCTCCCATTCCATGGCCAGAAGCCTTGTGCAGCTTCAAGAACTATATGTTTCTGAGTGCCACATGATAGAGGAGATAGTTACAAAGGAAGACGAGAACAACGAGGGAGGCAGTAAAAACAAGATTTTATTTCCTGAATTGAAGGCTTTAAGACTTGAATTTCTGCCCGAACTGGAATGTGTTTGCTCAGGAGATTATGACTATGATATCCCATTGTGCGATGTTGGAGAGGACAAGGAAATGAATAATAATAAGAATAAGATTCAGATTTCATTTCCACAGTTAGAGAGATTGAGGCTTCAAGGAGTGCGGAAGCTAAAGTGTATTTGTTCAGGGGGGTACGACTACAACATCATGGTGTCATCAATTGAAGAGTGTCCAAAGATCGCAACCTTTCCCCATGGAAATGTAATTGTAAGCGCACCCAACCTTCATTCTATACTGTGGTCCGGTATGCCTACACTTGGAGACCTTAATTTGACGATACATTATTTTGGTAATTCAGAGAAATACGAGGTGGAGTTGCAAAAATTAGAGACATTTGAAGGCATCGAGCAACATGAACTGCTTCTTGGCTACATCACAAGACAAACAATGCTTGTCCTTCACACATGTCACAAGCTATTGAATTGCATCCCATCCAGCATGACGCACTTGTTCTCACATTTGGATTCATTTATTGTAAGAGAGTGTGGAGGCTTAGAAGAGATAGTCGAATCAAATGATTATGAAGGGGATGATAATAGTGAGATACAGTATGCATTACAGGATATGTATTTGTATTATCTGCCAAAACTGAAGCACATTTGGAAAAATCATGGTCAGGTGTTAGGCTTCAAGAATTTGAGCAACCTAACTATCAGTCGGTGCCATGATTTGAAATATGTGTTTCCGGATGTTTCCGTGGCCAGAAGCCTTCCGAAGTTGTTTAGACTTATAGTAAATGAATGTAGCAAGATGGAGGAGATCATCCGGAATAACTCTAATTCTGATTCTATACAACAACCAAAAGAGGCTAAGATCACATTCCCATCTTTAATCAGAATTGAACTAAAGAAGCTACCCAGCCTCAAATGTTTCTGTCCGAGCTCTTTCTCTTGCTATGTTGAACTGCCACAGTGTTGGAGCATAATCATTGAAGAATGCCCAGATATGGAGACCTTTTCTTATTTTGAAACTCTATATACACCATCTCTTGAGTATTTAAGTGTGGATAAAACCCAATTTGATAGAGACGAAGAGGTGAATGAGGTGATACAACGCCGTAAATGA 6198 0.3792 MNQLKNSSTSRTIARIPYFWTLGEKLEFACKLCYSQDGSRAILHRSDPHTFKLPHKLLECSLVVIGFNSLVTVTLIKLYIHTVSQSHSKHNLAFSAFSNYYHSLLASITGSPVLHSTLITISYSFKSCSFYRLTQLKFPHKLNTIWLCSAFSNYYHSLLASIVGLATLSVLHSTLIIDITCYSFKSCYLSLEAAHSTRHLYLRQRKMDCLTELAKELVSKLGDLVIESTVKHFKYLIQHKEIIANLNEEYEKLKGLKQALQGTVDEKIRNGHEIAPNVQNWLDGVGAIEKEFQRFYENEVNKNKKCFGGKCPNLAFNYSLGKRATKRTENITSLMEDGNKFRYISYRKAPPPLGSTFTKDFIKSFESRKKIITKVIEKLKDDGIKRISICGIGGVGKTTLVKELIQIIEKSQLFVKVVMAVVSQNPNYRMIQSQIADGLGLRFISESMEGRGRQLLAKLKEIGKVLIVLDDVWDALDLECIGLPSREDQKGCKILFTSRNEEECRKMGSQENFVVSLLSEDEAWYLFQAMAGDIVEKPDIHPIAKQVAKECGRLPLAIVIVGKALENKEKPKWEDSLEQLRSSQPSSLSDVPKLVYSSIELSFNFLGSREHKFFLMLCSLFPEDFDIPVESLLRHAMGLGLFKAISASWKARNRVHTLVGKLKRCFLLMNSDVPGCVKMHDIVRDAVISVASRDEHGFVVLNSMKRLKEEKLNDAIAISLILDEMEELENGSEYPKFQLLQVRSQGGKPISWPEHFFKGMPKLKVLTMQNLCIPKLQALFQASGNLHTLQVEYCDVRDVSVIGKELIHLEILSFAHSNIEELPTEIGNLGFLRLLDLTGCNDLNFIHANVLSRLSRLEELYLRIENFPWKKNDVVIKELQNMSHQLKIVEMKVKGFEILVKDLDFKSLERFWVYVAPYTNLQRSQYLESNTLEVTAIDYNSIKSMLMIMQLVKKCEILILRKVKDLKTIFGELSNSELPYLKDLRIDSCSNLECLIDHTLRSNAFPQIQSLSLKNLNNLREICYASDYHEVKESMLKFLNLVKLELTYLPSLIGFSKAFDLNDPHHIQGTSHTQSTELTMSVKLFSSNWMQQFPKLETLLLQSCTSIVMVFDMQGYSDLDSQVFPQLKEIKIVDLNQLRCVWSKAIHGVQGFDNLRSLTISNCDSLRHVFTPTIVKAITKFEQLDIKSCKSMENLVIDNEDDEEGDHTNKEKVNIISFDKLDSLTLSTLPSFVGICSNSYELELPSLRKLEIDDCPKLNISFWLTAHAKLNNGTGSENFEKNYSRSSNWHFGCTSLCSKLVRQSNTNKKSNKTVLLPHDQVPSISVKKTKVEVGHLPILEELGVRNCDLHDKLMSQEEDETRIRRGPVIDGHLFPNLKSITMQSCNMISVLLSPSSSRCLRCLEKLHLKNCKNIEAIVSQEEAEANKILFPGLQCLLLVDLPNIKAFCQASYDFDFQSLKEVTIKDCPKMEVFSQGSSHTPKLEDVTMEIKLHSSNYIKNKDLNATIQGFKAFVALQGYEMLRWTKLRNEGMFGYFMKNSEINITEFHNLSKLVSFNEIQMLQHVRKLTIEDCDSLVEVFESEGGEGAKKRDATTHYQLEDMRLENLPKLSHIWKDNIIKGVVSFQKLTSISIRRCHSLKSLFSHSMARSLVQLQELYVSECHMIEEIVTKEDENNEGGSKNKILFPELKALRLEFLPELECVCSGDYDYDIPLCDVGEDKEMNNNKNKIQISFPQLERLRLQGVRKLKCICSGGYDYNIMVSSIEECPKIATFPHGNVIVSAPNLHSILWSGMPTLGDLNLTIHYFGNSEKYEVELQKLETFEGIEQHELLLGYITRQTMLVLHTCHKLLNCIPSSMTHLFSHLDSFIVRECGGLEEIVESNDYEGDDNSEIQYALQDMYLYYLPKLKHIWKNHGQVLGFKNLSNLTISRCHDLKYVFPDVSVARSLPKLFRLIVNECSKMEEIIRNNSNSDSIQQPKEAKITFPSLIRIELKKLPSLKCFCPSSFSCYVELPQCWSIIIEECPDMETFSYFETLYTPSLEYLSVDKTQFDRDEEVNEVIQRRK* 2066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02627 2065 Gene3D - 518 606 IPR042197 -
Rops8g02627 2065 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 359 616 IPR027417 -
Rops8g02627 2065 Gene3D Ribonuclease Inhibitor 712 1062 IPR032675 -
Rops8g02627 2065 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1537 1703 - -
Rops8g02627 2065 PRINTS Disease resistance protein signature 827 843 - -
Rops8g02627 2065 PRINTS Disease resistance protein signature 386 401 - -
Rops8g02627 2065 PRINTS Disease resistance protein signature 459 473 - -
Rops8g02627 2065 PRINTS Disease resistance protein signature 551 565 - -
Rops8g02627 2065 FunFam Probable disease resistance protein At1g61300 354 512 - -
Rops8g02627 2065 Coils Coil 362 382 - -
Rops8g02627 2065 Gene3D Ribonuclease Inhibitor 1329 1707 IPR032675 -
Rops8g02627 2065 SUPERFAMILY RNI-like 1372 1670 - -
Rops8g02627 2065 Gene3D - 357 516 IPR027417 -
Rops8g02627 2065 SUPERFAMILY L domain-like 678 1055 - -
Rops8g02627 2065 Gene3D Ribonuclease Inhibitor 1071 1267 IPR032675 -
Rops8g02627 2065 Gene3D Ribonuclease Inhibitor 1826 2047 IPR032675 -
Rops8g02627 2065 SMART AAA_5 383 519 IPR003593 GO:0016887
Rops8g02627 2065 Coils Coil 236 263 - -
Rops8g02627 2065 Pfam NB-ARC domain 369 604 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02627 Rops-Chr8 59827371 59841793 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02627 372 742 WRKY Transcription Factor Family AT5G45050 24.479 1.06e-11 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02627 - - mtr:11412360 1976.44