Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02624 ATGGATTTTCTTACCGAACTGGCAAAAGAAACCGTGTCAAAACTTGGATATTTGGTAGTAGAATCTACTGTGAAGCAATTTAAATATCTGATCCAACACGAAAAAATCATAGCCAATTTGAAGAAAGAACACAAGAATTTGAATGGTATGAAGCGAGCATTGCAAAGGAGGGTGGATATAGAAAGAAGGAATGGAAATGAAATTGAATCTGACGTGCAAAAGTGGCTCTTTGACGTGGGAGCTATTGAAAATGAGTTACAAAGATTCTATGAAAATGAAGTGAAGAAGAATAAGAAATGTTTTGGTGGGAAGTGTCCAAATTTGGCATTTAATTACTCATTGGGTAAGCGAGCCACTAAAGACACAGAATATATTACAAGCTTGAAAGAGGAAAAAAATAAATTTCAGCAAATATCCTACCCTAAATCTCTACCCCCACTTGGATCTACCTTCGTAGAAGACATTAAGAGCTTGGAGTCCAGAAATACAATTATAACAGAGGTCACAGAGAAATTGAAGGACGAAAAGTTCAAAAGGATTGGTATTTGTGGGATGGGTGGAGTGGGAAAAACGACCCTGGTGAAAGAATTGATCCAAATTGTAGAAAAAAGTAAGCTTTTTGATGAAGTTGTGATGGCAGTAGTATCCCAAAATCCAAATTATGAGAATATCCAAAATCGAATTGCTGATGGTTTAGGCCTGAAATTGACAAAGGAGAGTTTGGAAGAAAAAGCAAGGCAATTGCACCAGAGGTTGAACCAAAATGACAAAGTCCTAATAGTGCTGGATGATGTGTGGGACGAACTTGAGTTTGAAAAGGTTGGTATTCCTTCTCAGGATCATCAGAAGGGTTGCAAGATATTGTTCACATCACGAAATGTAGAAGTGTGTCAAAAGATGGGAAGCCAAGCAGAGTTTCAAGTCTCTGTGTTGTTGGATGATGAAGCTTGGTGTCTATTTCGGGAGATGGCAGGGGATGTTGTGGATAAACCTGATATCCATCCAATAGCAAAAGAGGTTGCAAAGGAATGCGCTGGCTTGCCCCTTGCAATTGTGACAGTTGCAAGAGCACTTGGCAATGAGGAAAAATTTGTGTGGGAGGATGCACGTGATCAATTGAGAGACTCTCAATCGTCTTCCTTCGCAAACATGCAAAAATGTGTATATTCACGTATCGAACTTAGCATCAATTTTTTGAATAGTGAACACAGATCTTGTCTTCTACTTTGTGGCTTATTCCCAGAAGACTTTGACATTCCTGTTGAAAGTCTTATGCGTCATGTCTTGGGCTTGGAATTGTTTAAGGCTGTTGATGTAGTACGAAAAGCAAGAAACCATGCGAATGTTTTGGTGAACAAATTGAAGAGGGGCTTCTTATTGCTAGATAGCAATGAGCCAGGGTGCTTTAAGATTCATGATGTTGTGCGTGATGTTATCCTGGAAATTGCATCTAGAGAAGAACACGGGATTTTGGTGCAGAGTAATGCTGAATTGAAGCGGCTAAAACAAGGCAAATGGCTTACAACATCACTTATTTTTGATGAGAAGTTTGAGTTTGAAAATGATTTAAAGTGTCCAACGGTTGAGCTTTTACAAGTACGATCAGTAAGTAAAACACCAATTCCTTGGATAGCAAACTTCATGCAAGGAATGAACAAACTCAAAGTTCTAACAATGCAAAATCTGTGCATTCCAAAAATGTCATCTCTTTCCCAAGCCTCGGTCAACCTTCATACATTGCAAGTAGAAGGTTGTGATGTTGGAGATATATCCGTAATTGGTAAAGAGCTTAAGAAACTAGAAATCCTAAGCTTTGCCAACTCAAATATTAAAGAACTTCCAACTGAGATCGGACTGCTAAGATTTCTAAGATTGTTGGATTTGACAGGATGTGATGATCTTAACTTCATTTCTGCTAATGTCTTGGCTAGACTATCTCGGTTGGAAGAACTTTATTTCAGGGTAGAAAATTTTCCCTGGATGCTAAACAAAGTCGTTCTTGAAGAGTTAAGAAATCTTTCTCAACAATTGAAGGTTCTTGAGATCAAAGTAAACAAGGTACAAATTTTACCTGACAATTTGATTTTCAGAAACCTAGAGAAATTTTGGGTTTATGTGGTTCCTTATAATTATTACAAGCGTCATGGATATTTGGAGTCAAATGTATTACAATTCAAAGCTACTGATTACAACTCTATTAAGTGTAGCTTGACAGCCATGCAATTGGTTAAGAAATGTGAAATTCTCATCTTAGAAAAAGTGAAAGACTTGAAAAATGTCATCAATGAATTAGATGACAGTGGACTCCAAAACTTGAAAGATCTAAGGCTTGATTCCTGTCCCAATCTTGAGCATGTCATGGATTGTAGCACTCCTTGTGGTGCCTTCCCGCTAATCAAGTCATTATCTTTGAATAATCTTACCAAATTAAGAGAAATATTTTGTGCATCTAGGCATCAAGAAATAAAAAGTTCCATGATCGGATTCTCAGAATTAGAGGAATTGGAATTAATAGACCTCCCAAACTTGATTGGCTTCGATAACACAATTGATTTGAATGAGCTCCATCAGCCAACTCATCATGGATTGAATTCTACCACTAAATTAGCTGATTCCACAAATGTTGAGGATGGTGAAGTATTAATCAAACCCCATTCAGAATCAGAGGGTTGTAGATCCTTACCAATCAATGCCAAGCTGTTTCCATTTAGTTGGATGACACAATTCCAAAAATTGGAAACAATCTTGTTACAAGGATGCAAATTGTTAGAAATGGTGTTTGACTTACAAGGATATTCACAATCTCATGGCCAACCACTAGCTTCGTTGTTTCCTCAATTGAAAGTAATCAAGATGTTATCCCTCAATAATCTAACATATGTTTGGGGTAATGTTCCACACTATGTTCAAGGCTTCCAAAATTTGAGATCTCTGACAATCTTCGATTGTCACTCTTTAAGATATGTATTTCCTTCTACCATTGTTGGAGCAATCATGAATCTTGAGGAATTGGAAGTAAGGTCCTGTAAGTCGATTGAGAATTTAGTGGTTTGGAGCAAAGATGATGAAGAGAACGACAATAAAGGTCAAGGGCAAGGGACAAATATTGTCTTCAATAAACTACATTCTATAACACTTTCAAAACTTCCAAAGTTGGTGAGTAGTTGTTCAGATTCTCTTAATTTAGAATGTCCATCCTTGAGGAAACTTACCATTGATGATTGTCCCATGTTGGAGATATCTTTATTACCATCCCATATCCATTTAAAGCAAGATAATTTTGATGTCACATATCTTGCAAAAGTAGAAGATACTGGTTTTCTCAGTTTGAGAGAAAATAACTCAAGGCCTTCTGGTTGGCCCCTGAGATGTATGCCATTTTTACCCAAATTTATTCCCAAAGGAAACACAAGGAAGAAAAGTATGAAGGAAGTATCACTAGCACGAGATCACGTGCCTTCCAATTTTGAAATGAAGAGCAAGAAAGAAAAAGACCATGTGCCTATTCTAGAAGACCTTAATGTAAGAAAATGTGATTTGCTGGATGCTTTGTTTTTTCTAGAGGAAGAAGACAATATCACCATTCCATCACACCTGAGAACCATCAAAATTGAAGAGTGTGACAAGTTAGAGACCATTGTCGCTAAGAGTGAAGAGAGAAAAGACGTGATAAATTGTTTCACTCAGCTAGAGTCTCTTCACTTAAAGAAACTGTCAAATCTTTTGAGGCTTTGCTCTTCTGCAACCAATAAATCCTTGGACAAACAACAGGACATGGATGCATGTGAGGGAGATCACGAAATGATAAGACGTCACCCATTTATTGATGAGATCTTGTTCCCAAACTTAACATCTCTGTTCATAGAAGCCTGCAACAAAATCAGCATCTTGTTCTCTCACTCATGTTTGAGTAGCCTTGAGCATCTTGAGAAGTTAGAAGTATGCCATTGCGTGAACATGGAAGAAATTGTATCTCAAGAAGAAATAGAAGCAAGTGCAAATAATATTATATTCCCTGGAATGCAGCATTTAGCTCTTAAAGGCCTTCCCAACCTCAAGGCCTTCTGCCAAGGTTCTCATAATTTCAATTTTCCATCACTGAAAGAAGTAAAAATTGAAGATTGTCCCAATATGGAAGTGTTTTCACAAGGATCTTCTCATACACCTAACCTTGAGGATGTCATCATGAAGATTGAACCGCACAGCCATAACTATATACAGAATAAAGACCTGAATGCCACTATACGAGGATTTAAAGCATTTGTGGCATTACAAGAATCTGAGATGTTGAGGTGGACCGAGCTCCATAACAAAGGCGTATTGGGAGACTTCAATAAAAACTCAGAAATAAATATTATAAAATTTCATAAACTATCAAAGCTTGTTTCGTTCAATGAGATACAAATGCTTCAACATGTGAGGAAACTCACCATAGAAGATTGTGATTCACTAGTTGAAGTGTTCGAATCAGAAGGAGGAGAAGGTGTAAGAAGAAGGGATGCCACCACACATTATCAGCTAGAAGAGATGGAATTGGATAATTTGCCAAAACTGAGTCACATATGGAAAGACAATATTATTAAAGGGGTTGTGAGCTTCCAGAAGCTAACATCAATTGTTGTTCTACATTGTCACAGTTTGAAGAGTTTGTTCTCCCATTCCATGGCCAGAAGCCTTGTGCACCTTCAATCACTAGATGTTCGAAGTTGTAACATGATAGAGGAGATAGTTACAAAGGAAGACGAGAACAACGAGGGAGGCAGTAAAGTTTTATTTCCTCAATTGAAGAAGTTGACACTTATGAATCTGCCCGAACTGGAATGTGTTTGCTCAGGAGATTATGACTATGATATCCCATTGTGCGATGTTGGAGAGGACAAGGAAATGAATAATAATAAGATTCAGATTTCATTTCCAAAATTAGAGTATGTGTATCTTTATGAAGTGCGGAAGCTAAAGTGTTTTTGTTCAGGGGGGTACGACTACAACATCATGGTGTCATCAATTGAAGAGTGTCCAAAGATCGCAACCTTTCCCCATGGAAATGTAATTGTAAGCGCACCCAACCTTCATTCTATATGGTCTTTTCGTACACTTGGAGACCTTAATTTGACGATACATTATCTTCATAATTCAGAGAAATACGAGGTGGAGTTGCAAAAATTAGAGACATTTGAAGGCATCGAGCAACATGAACTGCTTCTTGGCTACATCACAAGACAAGGAGTGCTTGTCCTTGACAGAAATCACAAGCTATTGAATTGCATCCCATCCCGCATGACGCACTTGTTCTCACACTTGGATTCACTTGTTATCAGGCAGTGCCATGATTTGAAATATGTGTTTCCGGATGTTTCCGTGGCCAGAAGCCTTCCAAATTTGGAGAGAATTGAAGTAAATGAATGCAAGAAGATGGAGGAGATCATCCGGAATAACTCTAATTCTGATTCTATACAACAACCAAAAGAGGCTAAGATCACATTCCCATCTTTATGGGAAATTAAACTGTCCAAGCTACCCAGCCTCAAATGTTTCTGTCCGAGCTCTTTCTCTTGCTATGTTGAACTGCCAGAGTGTCGCTGGATAATCATTGAAGAATGCCCAAATATGGAGACCTTTTCTTATGGTGGAACAGTATACACACCAAGGCTTTATGATTTCAGAGTGGACAACACTAGATTTGATGAATACGAAGAGGTGAACGAGGATGATGTAACTCACGAAGATGTAATTGAAAGGCTATGTACAACTCATATCTTGGACAAGCAAGGGAGAGTTGATCATATCAAGAGACCTGGTGTTCAGATCATATTTAGGTGTTATCAAAGAGATAAAGATCCTTGA 5844 0.3792 MDFLTELAKETVSKLGYLVVESTVKQFKYLIQHEKIIANLKKEHKNLNGMKRALQRRVDIERRNGNEIESDVQKWLFDVGAIENELQRFYENEVKKNKKCFGGKCPNLAFNYSLGKRATKDTEYITSLKEEKNKFQQISYPKSLPPLGSTFVEDIKSLESRNTIITEVTEKLKDEKFKRIGICGMGGVGKTTLVKELIQIVEKSKLFDEVVMAVVSQNPNYENIQNRIADGLGLKLTKESLEEKARQLHQRLNQNDKVLIVLDDVWDELEFEKVGIPSQDHQKGCKILFTSRNVEVCQKMGSQAEFQVSVLLDDEAWCLFREMAGDVVDKPDIHPIAKEVAKECAGLPLAIVTVARALGNEEKFVWEDARDQLRDSQSSSFANMQKCVYSRIELSINFLNSEHRSCLLLCGLFPEDFDIPVESLMRHVLGLELFKAVDVVRKARNHANVLVNKLKRGFLLLDSNEPGCFKIHDVVRDVILEIASREEHGILVQSNAELKRLKQGKWLTTSLIFDEKFEFENDLKCPTVELLQVRSVSKTPIPWIANFMQGMNKLKVLTMQNLCIPKMSSLSQASVNLHTLQVEGCDVGDISVIGKELKKLEILSFANSNIKELPTEIGLLRFLRLLDLTGCDDLNFISANVLARLSRLEELYFRVENFPWMLNKVVLEELRNLSQQLKVLEIKVNKVQILPDNLIFRNLEKFWVYVVPYNYYKRHGYLESNVLQFKATDYNSIKCSLTAMQLVKKCEILILEKVKDLKNVINELDDSGLQNLKDLRLDSCPNLEHVMDCSTPCGAFPLIKSLSLNNLTKLREIFCASRHQEIKSSMIGFSELEELELIDLPNLIGFDNTIDLNELHQPTHHGLNSTTKLADSTNVEDGEVLIKPHSESEGCRSLPINAKLFPFSWMTQFQKLETILLQGCKLLEMVFDLQGYSQSHGQPLASLFPQLKVIKMLSLNNLTYVWGNVPHYVQGFQNLRSLTIFDCHSLRYVFPSTIVGAIMNLEELEVRSCKSIENLVVWSKDDEENDNKGQGQGTNIVFNKLHSITLSKLPKLVSSCSDSLNLECPSLRKLTIDDCPMLEISLLPSHIHLKQDNFDVTYLAKVEDTGFLSLRENNSRPSGWPLRCMPFLPKFIPKGNTRKKSMKEVSLARDHVPSNFEMKSKKEKDHVPILEDLNVRKCDLLDALFFLEEEDNITIPSHLRTIKIEECDKLETIVAKSEERKDVINCFTQLESLHLKKLSNLLRLCSSATNKSLDKQQDMDACEGDHEMIRRHPFIDEILFPNLTSLFIEACNKISILFSHSCLSSLEHLEKLEVCHCVNMEEIVSQEEIEASANNIIFPGMQHLALKGLPNLKAFCQGSHNFNFPSLKEVKIEDCPNMEVFSQGSSHTPNLEDVIMKIEPHSHNYIQNKDLNATIRGFKAFVALQESEMLRWTELHNKGVLGDFNKNSEINIIKFHKLSKLVSFNEIQMLQHVRKLTIEDCDSLVEVFESEGGEGVRRRDATTHYQLEEMELDNLPKLSHIWKDNIIKGVVSFQKLTSIVVLHCHSLKSLFSHSMARSLVHLQSLDVRSCNMIEEIVTKEDENNEGGSKVLFPQLKKLTLMNLPELECVCSGDYDYDIPLCDVGEDKEMNNNKIQISFPKLEYVYLYEVRKLKCFCSGGYDYNIMVSSIEECPKIATFPHGNVIVSAPNLHSIWSFRTLGDLNLTIHYLHNSEKYEVELQKLETFEGIEQHELLLGYITRQGVLVLDRNHKLLNCIPSRMTHLFSHLDSLVIRQCHDLKYVFPDVSVARSLPNLERIEVNECKKMEEIIRNNSNSDSIQQPKEAKITFPSLWEIKLSKLPSLKCFCPSSFSCYVELPECRWIIIEECPNMETFSYGGTVYTPRLYDFRVDNTRFDEYEEVNEDDVTHEDVIERLCTTHILDKQGRVDHIKRPGVQIIFRCYQRDKDP* 1948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02624 1947 Gene3D - 396 481 IPR036388 -
Rops8g02624 1947 Gene3D Ribonuclease Inhibitor 1217 1613 IPR032675 -
Rops8g02624 1947 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 877 1082 - -
Rops8g02624 1947 Pfam NB-ARC domain 163 396 IPR002182 GO:0043531
Rops8g02624 1947 Coils Coil 663 690 - -
Rops8g02624 1947 Coils Coil 238 258 - -
Rops8g02624 1947 PRINTS Disease resistance protein signature 179 194 - -
Rops8g02624 1947 PRINTS Disease resistance protein signature 344 358 - -
Rops8g02624 1947 PRINTS Disease resistance protein signature 252 266 - -
Rops8g02624 1947 PRINTS Disease resistance protein signature 618 634 - -
Rops8g02624 1947 SUPERFAMILY RNI-like 768 1078 - -
Rops8g02624 1947 Gene3D - 130 309 IPR027417 -
Rops8g02624 1947 SMART AAA_5 176 312 IPR003593 GO:0016887
Rops8g02624 1947 Coils Coil 30 57 - -
Rops8g02624 1947 Gene3D Ribonuclease Inhibitor 515 883 IPR032675 -
Rops8g02624 1947 SUPERFAMILY RNI-like 1280 1809 - -
Rops8g02624 1947 FunFam Probable disease resistance protein At1g61300 149 305 - -
Rops8g02624 1947 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 410 IPR027417 -
Rops8g02624 1947 SUPERFAMILY L domain-like 470 847 - -
Rops8g02624 1947 Gene3D Ribonuclease Inhibitor 892 1094 IPR032675 -
Rops8g02624 1947 Gene3D Ribonuclease Inhibitor 1637 1877 IPR032675 -
Rops8g02624 1947 Gene3D - 311 395 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02624 Rops-Chr8 59750157 59760118 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02624 180 533 WRKY Transcription Factor Family AT5G45050 24.586 6.75e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02624 - - lja:Lj1g3v4058580.1 2087.77