Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02615 ATGGGATCTCAAGGTGGAGCAATCCAAGAGCCAAAGACTGGACCTTTGGCAAGGCAAGGGTCCTTATACAATCTCACCCTTGATGAGGTGCAAAACCAGCTTGGAAATTTAGGGAAACCCTTAGGGAGTATGAATCTGGATGAGCTGCTAAAAAGTGTGTGGACTGCTGAAGCTGCTCAGGCCTCTGGTTCTGGATTGGATTCTGGTACTGATGCTTACATGCAGCATGGTCAGCCTGTTTCAGGGTCAGCTTTGAATCCACAAGGGAGCCTAACATTGTCTGGTGACCTTAGCAAGAAAACTATTGATGAGGTTTGGAGAGAGATGCAACAGAAGAAGAGTGGTACTAATCAGGATAGGAAAACTCAAGAAAGACAGGTTACACTGGGTGAGATGACCCTTGAGGATTTCTTGGTGAAGGCTGGTGTGGCTACTGAATCTTTTCCTACCGAGGATAGTGCTATGTCAGGAGGGGTTGATTCCCAACACAATACATCTCAGCATGCTCATTGGATCCAATATCAGTTACCTTCAGTGCAGCAGCCACCACAACAGCAACAAACTCAGCAGAATAATATGTTGCCGGGTTTTACAGGTTTTATGGCTGGCCATGTTGTTCAACAGCCTATCCCGGTTGCAGTGAATCCAGTTTTGGATGCAGGATACTCTGATGCAATGGTGACTGTGTCACCATCTTCTTTAGTGGGTACCTTATCAGATACACAAACTTCGAGTAGGAAAAGGGTTGCCTCTGGTTATGTGGTTGAGAAAACTGTGGAGAGGAGGCAGAAGAGGATGATTAAGAATAGGGAATCTGCTGCTCGGTCACGGGCTAGAAAACAGGCTTACACACAAGAACTGGAGATTAAAGTTTCACGTTTAGAAGAAGAGAATGAAAGGCTTAAAAGACAGCATGAGATAGAGAGGGTGTTGCCAAGTGTGCCACCACCAGACCCTAAGCATCAGCTTCGCAGAACTAGCTCAGCTCCCCTTTGA 996 0.4629 MGSQGGAIQEPKTGPLARQGSLYNLTLDEVQNQLGNLGKPLGSMNLDELLKSVWTAEAAQASGSGLDSGTDAYMQHGQPVSGSALNPQGSLTLSGDLSKKTIDEVWREMQQKKSGTNQDRKTQERQVTLGEMTLEDFLVKAGVATESFPTEDSAMSGGVDSQHNTSQHAHWIQYQLPSVQQPPQQQQTQQNNMLPGFTGFMAGHVVQQPIPVAVNPVLDAGYSDAMVTVSPSSLVGTLSDTQTSSRKRVASGYVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSRLEEENERLKRQHEIERVLPSVPPPDPKHQLRRTSSAPL* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02615 331 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 259 304 IPR004827 GO:0003700|GO:0006355
Rops8g02615 331 Coils Coil 277 311 - -
Rops8g02615 331 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 16 330 IPR043452 GO:0003700|GO:0045893
Rops8g02615 331 MobiDBLite consensus disorder prediction 1 20 - -
Rops8g02615 331 Gene3D - 259 310 - -
Rops8g02615 331 SUPERFAMILY Leucine zipper domain 261 307 IPR046347 GO:0003700|GO:0006355
Rops8g02615 331 CDD bZIP_plant_BZIP46 261 306 - -
Rops8g02615 331 MobiDBLite consensus disorder prediction 306 331 - -
Rops8g02615 331 SMART brlzneu 257 325 IPR004827 GO:0003700|GO:0006355
Rops8g02615 331 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 264 279 IPR004827 GO:0003700|GO:0006355
Rops8g02615 331 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 259 311 - -
Rops8g02615 331 Pfam bZIP transcription factor 261 304 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02615 Rops-Chr8 59616665 59622021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02615 1 331 bZIP Transcription Factor Family AT3G56850 56.342 1.88e-109 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops8g02615 bZIP_1 1.6e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02615 K14432 - gmx:100783666 457.603