Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02553 ATGAAGCAGATATCAATCCTCTTCTTTTTCGTTATACTTCCCATGGCATTTGCTAAGCTACAGGTTGGGTTCTATGGCTCCACATGTCGAAAAGCAGAGTCAATTGTGAAGCAAGGGGTGCAGAAAGGATTCAATCGTGACAAGCCCATAACAGCAGCCTTACTTCGCATGCATTTCCATGACTGTTTTGTCAGAGAAAGGCTTGAAGCTGAATGTCCTTCAACAGTGTCATGTGCAGATATCATAATAACATTAGCTACCAGAGATGCTGTGGCCTTTTGGGGGCACATACTGTTGGCATTGATCACTGCGGTTTCTTTCTCTCAAGCTCCAGGGGGAAATCTGATCCTACTATGGACCCTGCGTTGGATACTAAGCTGGTCAAGTTGTGCAAAGAGAGGCATATTGCAGATTGATCAGCAGCTTGCTTTAGATAAATCCACGAGCCCTTTTGTGTCAGCTTTCGCGTCAAATGGTGACAAGTGTGTCAAGAGTTTTGCAAACGCAATGATAAAAATGGGAAATATTGAAGTTCTGGTTGGAAATGAAGGAGAAATTCGCAAGAATTGCAGGGTCTTCAACAAGCGCAATTAG 594 0.436 MKQISILFFFVILPMAFAKLQVGFYGSTCRKAESIVKQGVQKGFNRDKPITAALLRMHFHDCFVRERLEAECPSTVSCADIIITLATRDAVAFWGHILLALITAVSFSQAPGGNLILLWTLRWILSWSSCAKRGILQIDQQLALDKSTSPFVSAFASNGDKCVKSFANAMIKMGNIEVLVGNEGEIRKNCRVFNKRN* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02553 197 PANTHER PEROXIDASE 72-RELATED 130 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops8g02553 197 ProSitePatterns Peroxidases active site signature. 51 62 IPR019794 GO:0004601
Rops8g02553 197 PRINTS Haem peroxidase superfamily signature 76 93 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops8g02553 197 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops8g02553 197 Gene3D - 174 194 - -
Rops8g02553 197 Gene3D - 66 96 - -
Rops8g02553 197 Gene3D - 20 65 - -
Rops8g02553 197 Gene3D Peroxidase, domain 2 131 173 - -
Rops8g02553 197 SUPERFAMILY Heme-dependent peroxidases 20 194 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops8g02553 197 ProSiteProfiles Plant heme peroxidase family profile. 19 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02553 Rops-Chr8 58531422 58532278 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02553 5 95 Peroxidase AT5G17820 45.161 6.79e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02553 K00430 - thj:104804948 143.665