Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02552 ATGAAGATCATAATCCTCCTCTTTTTCTTTATGGTTCCCTTGGCATTTGCTGACCTGAAAGTTGGATTCTATGCCTCCACTTGCCCAAAAGCAGAGTCCATTGTGCAGCAAGTGGTGAAGAATCGGTTCAATCGTGACAAGTCCATAACAGCAGCTTTGCTTCGCATGCATTTCCATGACTGTTTTGTCAGAGGTTGTGATGCATCCATACTCATAAACTCCACCAAGGATACTATCCCAGAGAGAAATTCACCTACAAATGAAGGTGTCCGGGGATATGATCTGATTGATGAGGTGAAGGAGAGGCTTGAAGCTGAATGTCCTTCAACAGTGTCATGTGCAGATATCATAACATTAGCAACCAGAGATGCTGTGGCCTTATCTGGTGGATCCAAATACATTGTTCCCACTGGAAGACGTGATGGATTAGTCTCTGATGGTAATGAAGTTGATATTCCAGGACCCAGAGCTCCCGTGTCCTTTACATCGCAATTTTTTGCTAGAAAGGGCATAACAACAGAGGAAATGGTGACCCTTTTTGGTGCACATACAGTTGGTGTTGCAAGTTGCGGTTTCTTTTCTAGTAGACTTTCAAGTTCCAGGGGGAAACCTGACCCTACAATGGACCCTGCCTTAGATGCTAAGCTGGTCAAGTTGTGTAACTCAAAAGTGGAGGATGATGATCCAGCTGCATTTTTGGACCAGAGAACACCTTTTCTTGTTGATAATCAGTTCTACAAGCAGATTCTACTTAAGAGAGGTGTTTTGCAGATTGATCAGCAACTTGCCTTAGATACAACTACCAAGGGTTTTGTATCAGGTTTCGCATCAAATGGTGATAAATTCCAAGAGAGTTTTGCGAATGCAATGATAAAGATGGGGAAGATTGAAGTTCTGGTTGGAAATGAAGGAGAAATCCGCAAGAAATGCTGGGCTTTCAATAACCGCAACTAG 954 0.4298 MKIIILLFFFMVPLAFADLKVGFYASTCPKAESIVQQVVKNRFNRDKSITAALLRMHFHDCFVRGCDASILINSTKDTIPERNSPTNEGVRGYDLIDEVKERLEAECPSTVSCADIITLATRDAVALSGGSKYIVPTGRRDGLVSDGNEVDIPGPRAPVSFTSQFFARKGITTEEMVTLFGAHTVGVASCGFFSSRLSSSRGKPDPTMDPALDAKLVKLCNSKVEDDDPAAFLDQRTPFLVDNQFYKQILLKRGVLQIDQQLALDTTTKGFVSGFASNGDKFQESFANAMIKMGKIEVLVGNEGEIRKKCWAFNNRN* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02552 317 PANTHER - 4 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops8g02552 317 Gene3D - 22 314 - -
Rops8g02552 317 Gene3D Peroxidase, domain 2 153 293 - -
Rops8g02552 317 FunFam Peroxidase 153 293 - -
Rops8g02552 317 CDD secretory_peroxidase 19 313 IPR033905 GO:0004601|GO:0042744
Rops8g02552 317 ProSitePatterns Peroxidases active site signature. 50 61 IPR019794 GO:0004601
Rops8g02552 317 PRINTS Haem peroxidase superfamily signature 50 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops8g02552 317 PRINTS Haem peroxidase superfamily signature 111 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops8g02552 317 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops8g02552 317 PRINTS Haem peroxidase superfamily signature 129 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops8g02552 317 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops8g02552 317 Pfam Peroxidase 35 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops8g02552 317 SUPERFAMILY Heme-dependent peroxidases 18 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops8g02552 317 FunFam Peroxidase 22 155 - -
Rops8g02552 317 ProSiteProfiles Plant heme peroxidase family profile. 18 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops8g02552 317 PRINTS Plant peroxidase signature 52 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops8g02552 317 PRINTS Plant peroxidase signature 110 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops8g02552 317 PRINTS Plant peroxidase signature 28 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops8g02552 317 PRINTS Plant peroxidase signature 91 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops8g02552 317 PRINTS Plant peroxidase signature 129 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops8g02552 317 PRINTS Plant peroxidase signature 174 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops8g02552 317 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops8g02552 317 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops8g02552 317 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02552 Rops-Chr8 58528051 58530001 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02552 1 315 Peroxidase AT4G26010 54.859 9.00e-123 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02552 K00430 - gmx:100777946 456.832